Bucephala clangula (common goldeneye): 308452489
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Entry
308452489 CDS
T11949
Symbol
SDC3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
bcla
Bucephala clangula (common goldeneye)
Pathway
bcla04514
Cell adhesion molecule (CAM) interaction
bcla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
308452489 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
308452489 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bcla00535
]
308452489 (SDC3)
Proteoglycans [BR:
bcla00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
308452489 (SDC3)
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Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
308452489
NCBI-ProteinID:
XP_080820149
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Position
25:2123400..2158642
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AA seq
423 aa
AA seq
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MPAEPPPPPPARGPRGLAVPLLLLLLLLGGGARPAAAQRWRNENYERPVDLEGSGDDDPF
GDDELDDVYSGSGSGYFEQESGLETAVSLTTDTSVTLPTTAAALPVTAVQPVATPFETSP
TEDTVPEQTTGASYIPRVTEAPVIPSWKATTTSTTASEAPSTTTTTTTTTAATTTTTATT
TTSTTTVATAKPTTVRRFLPPFVTKAATTRATTLETPTTSVLETSTPTEVATTQLVPSST
AKPRSLPKPSTSRTADLTEKSTALPSSPTTLPPTEAPQVEPGEVSTVLDSDLEVPVSSGP
SGDFEIREEEETTRPELGNEVVAVVTPPSAPGPGRNAEPGLIDNTIESGSSAAQLPQKNI
LERKEVLIAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQANVTYQKPDKQEE
FYA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcggagccgccgccgccgccgcccgcccggggcccgcggggcctcgcggtgccg
ctgctgctgctgctgctgctgctgggggggggcgcccgccccgccgcggctcagcgctgg
cgcaatgagaactacgagaggccagtggacctggagggctccggggatgatgaccccttt
ggggacgatgaactggatgatgtctactcgggctctggctcgggctacttcgagcaggag
tcggggctggagacggccgtcagcctcaccacggacacgtccgtcacgctccccaccacg
gcagccgcactgcccgtcactgcggtgcagcccgtggctaccccctttgaaacgtccccc
accgaggacaccgtccccgagcagaccaccggcgcctcgtatatccccagggtgacagag
gccccggtgatccccagctggaaggccaccaccaccagcaccactgccagcgaggccccc
agcaccaccaccaccaccaccaccaccacagctgccaccaccaccaccacggccaccacc
accaccagcaccaccaccgtggccactgccaagcccaccaccgtccggaggttcctgccc
ccctttgtcaccaaggcggccaccacgagggccaccaccctggagacgcccaccacatcc
gtcctcgaaaccagcacgccaacggaggtggccacgacacagcttgtcccctccagcacg
gccaagcccaggtccctgccaaaaccaagcacctccaggactgcagacctcacggaaaaa
agcactgccttgccttccagccccaccacgctgccacccacagaagccccccaggtggag
ccaggggaggtgtcaacggtcctcgacagcgacctggaagtcccggtcagcagtggcccc
agtggggacttcgagatccgggaggaggaggagacaactcgtcccgagctgggcaacgag
gtggtggccgtggtgacaccgccatcggcaccggggccgggcaggaacgcggagcctggg
ctcatcgacaacacgatagagtcgggcagctcggccgctcagctcccccagaagaacatc
ctggagaggaaggaggtgttgatagcggtgatcgtgggcggcgtggtgggagccctcttc
gctgccttcctcgtcatgctgctcatctaccggatgaagaagaaggacgagggcagctac
acgctggaggaacccaagcaagccaacgtcacctaccagaagccggacaagcaggaggag
ttttacgcgtag
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