Bucephala clangula (common goldeneye): 308452556
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Entry
308452556 CDS
T11949
Symbol
SARS1
Name
(RefSeq) serine--tRNA ligase, cytoplasmic isoform 1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
bcla Bucephala clangula (common goldeneye)
Pathway
bcla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
308452556 (SARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bcla01007
]
308452556 (SARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcla03016
]
308452556 (SARS1)
Enzymes [BR:
bcla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
308452556 (SARS1)
Amino acid related enzymes [BR:
bcla01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
308452556 (SARS1)
Transfer RNA biogenesis [BR:
bcla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
308452556 (SARS1)
Prokaryotic type
308452556 (SARS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NOD
GlyRS_ins_1
Motif
Other DBs
NCBI-GeneID:
308452556
NCBI-ProteinID:
XP_080820277
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All DBs
Position
26:6132306..6138351
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AA seq
542 aa
AA seq
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MVLDLDLFRADKGGDPGAVREMQRKRFKDPALVDALVRADGAWRRCRFRADNLNKLKNLC
SKTIGDKMKKKEPVGTDESVPESAQNLDELTADILGGLQVSQIKKVRLLIDEAILKCDAE
RVRLEAERFESLREIGNLLHPSVPISNDEDVDNKVERVWGDCSCRKKYSHVDLVVMVDGY
EGEKGAVVAGSRGYFLKGPLVFLEQALIQYALQSLRAKGYTPVYTPFFMRKEVMQEVAQL
SQFDEELYKVIGKGSEKAEDSSIDEKYLIATSEQPIAALHRDEWLKPEDLPIKYAGLSTC
FRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDNKSWEMFDEMIATAEDFYQSLGIPYH
IVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV
RARGLADGGWSCSPRLLLHCFPPTLLQVEFVHMLNATMCATTRTICAILENYQTEEGILI
PERLCDFMPPDLREMIPFVKPAPIEQELSKKQKKQQEGSKKKSAGGDRVLEEQMQNMGVN
SA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggacctggacctgttccgcgccgacaagggcggcgaccccggcgccgtgcgg
gagatgcagcggaagcgcttcaaggacccggcgctggtggacgcgctggtgcgggccgac
ggcgcctggcggaggtgtaggtttcgtgccgataacctgaacaagctgaagaacctgtgc
agcaaaacaattggggacaagatgaagaaaaaagaacccgtggggaccgacgagtctgtt
ccagagagcgcgcagaacctggatgagctcacggctgacatcctcggggggctgcaggta
tcccagatcaagaaagtccgtctcctgatcgacgaagccatcctcaagtgcgacgccgag
cgcgtcaggctggaggcagagcgcttcgagagtctccgggagatcgggaacctcctccac
ccctccgtgcccatcagcaacgacgaggacgtggacaacaaggtggagcgggtctggggt
gactgcagctgcaggaagaagtattcccacgtggacctggtggtgatggtggacggttac
gagggagagaagggagccgtcgtcgcggggagccggggctacttccttaagggtcccctg
gtgtttctggagcaggccctgatccagtacgccttgcagagcctccgcgccaagggctac
actcctgtctacacccccttcttcatgcgcaaggaggtgatgcaggaggtggcccagctc
agccagttcgacgaggagctgtacaaggtgattggcaagggcagcgagaaggcggaggac
agctccattgacgagaagtacctcatcgccacctccgagcagcccatcgcagccctgcac
cgggacgagtggctgaagccagaggatctgcccatcaagtacgcggggctgtcgacctgc
ttccgccaggaggtcggctcgcacggccgagacacccgcggcatcttccgcgtccaccag
ttcgagaagatcgagcagtttgtctacgcctcgccacatgacaacaagtcgtgggagatg
tttgatgagatgatcgccacggccgaggacttctaccagtccctgggcatcccctaccac
atcgttaacatcgtctcgggcgccttgaatcacgctgccagcaagaagctggacctggag
gcttggttcccggggtcaggggctttccgggagctcgtgtcctgctccaactgcaccgac
taccaggcacgccgcttgcgcatccgctacgggcagaccaagaagatgatggacaaggtg
agggcacgtggcttggctgacggggggtggtcctgctctccccgtcttctgcttcactgc
ttcccccccaccctgctgcaggtggagtttgtgcacatgctcaacgccacgatgtgtgcc
acaacccggaccatatgcgccatcctggagaactaccagacggaggagggcatcctcata
cccgagaggctgtgtgacttcatgcccccagacctccgagagatgatcccgttcgtaaag
ccggcccccatcgagcaggagctctccaagaagcagaagaagcagcaggagggcagcaag
aagaagtcggcaggaggagaccgggtgctggaggagcagatgcagaacatgggcgtgaac
agcgcctaa
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