KEGG   Bucephala clangula (common goldeneye): 308453349
Entry
308453349         CDS       T11949                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform 1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
bcla  Bucephala clangula (common goldeneye)
Brite
KEGG Orthology (KO) [BR:bcla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bcla03036]
    308453349 (KDM4B)
Enzymes [BR:bcla01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     308453349 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     308453349 (KDM4B)
Chromosome and associated proteins [BR:bcla03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    308453349 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141 DUF4537
Other DBs
NCBI-GeneID: 308453349
NCBI-ProteinID: XP_080821485
LinkDB
Position
28:complement(2882296..2976085)
AA seq 1111 aa
MGSENPSPQNPGCKIMTFRPTLEEFRDFGKYVAYIESQGAHRAGLAKVIPPKEWKPRKTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVEEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYDLWKQGKDIAVLDHMKPTALTSPELDAWNE
TKAELKAKLLRRIGDEEEDNKHRSHRKRSQPRRHKTEDQKSLGDVMAIETALEDVKVKEE
LKRGPDLEEEERSKAIEGEGDCKVKARPPKVKGERKKKHLFHQHQHHLQAPQPQQQQPPL
PPAPQQQLAEEEAPAARPPVPAAVPTSSTAEKSLPPAPLNIIQPSETPVEEDDFKPRPII
PMLYVVPRTKKVVFDKERMSCQQAFEQFATQKSPGWREQTVPLEIPVKEEENTEAGNTEI
ATEVSDLQTAAFSKMKMEIKKSRRHPLGKPPTRSPLSVVKQETSSDEETFPFSGEEDMSD
PEALKSLLSLQWKNKAHNFPAERKFNAAAALSEPYCAVCTLFYPYNQSLQVDKEAAPVSA
GETTSFVHLSKCGQKTKPLIPEMCFTSSGENTEPLPSNSYIGEDGTSPLISCAKCCLQVH
ASCYGIRPDLVNESWSCSRCSANAWAAECCLCNLRGGALQMTTDGRWIHIICAIAVPEAR
FLNVIERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSFHVTCAHAAGV
PMEPDDWPYVVSITCFKHKAANQNIPFRREVTLGQTVITKNRNGLYYRCKVIGTTTQTFY
EVNFDDGSYSDNVYPESIISRDCIQMGPPPEGEMVQLQWTDGIVYKAKFIAAQISQIYQV
EFEDGSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEDVFSGDEVRAAKRPRLGNSRN
PEEYGQNPDYLAFMESLLQTQYQPGTQSNMF
NT seq 3336 nt   +upstreamnt  +downstreamnt
atggggtctgaaaacccaagtccgcagaaccctggctgtaagatcatgacctttcgtccc
accctcgaggagtttcgggacttcgggaagtacgttgcttacattgaatcgcaaggagct
caccgagcagggcttgccaaggtgattcctccaaaggaatggaagccacgaaaaacctat
gatgacatagatgacatggttatcccagctcccattcagcaggtggttacaggccagtcg
gggttattcacccagtataacatacagaagaaaccaatgactgtgggagagtaccggcgt
ctggctaatagtgagaagtattgtactccacgccatcaagattttgaagacttggagcgc
aagtactggaagaatctcacatttgtctcaccaatttatggggctgatatcagcggctcg
ctgtatgacgcagatgtggaagaatggaatattggcaatctgaacaccctcttagacatg
gtggaacacgagtgtggtattattatagaaggtgtaaacactccgtacctctactttggg
atgtggaagacaacgtttgcttggcatacggaggacatggatctctacagtatcaactac
ttgcattttggggagccaaaatcctggtatgccattcctccagaacacggcaagaggttg
gaacgcctggcaaaaggattttttcctggaagctctcagggatgcgatgctttcctccgt
cacaagatgaccctcatttcgccctcaatcttgaagaagtacggcattccttttgaccgg
atcacccaggaagctggagagttcatgattacctttccttacggttaccatgctggcttc
aatcacggcttcaactgtgccgagtctaccaactttgccactttgcggtggatcgactac
ggaaaaatggcaacccaatgtacttgccgcaaagacatggtgaagatttccatggatgtc
tttgtgagggttctgcaaccagaacgttacgatctatggaaacaaggaaaagacattgct
gtcctggaccatatgaagcccacggctctgactagcccagaactagatgcctggaatgag
acgaaggcagaattgaaggccaaattgcttcgcaggataggagatgaggaagaggacaac
aaacaccggtctcacagaaaaagaagtcagcccagaagacataaaacagaggatcagaag
tctcttggggacgtcatggctattgaaactgccttggaagatgtgaaagtaaaagaggaa
ctgaaaagggggccagatctagaggaagaagagagaagcaaagcgattgagggagaaggt
gactgcaaagtaaaggcccgtcctccgaaagtaaaaggtgagaggaagaagaagcacctt
ttccatcaacaccagcaccatctgcaagcaccacagcctcagcagcagcagccacccctg
ccaccggcaccgcagcagcagctggcagaggaagaggcaccagcagcacggccaccagta
cccgcagcagtacccacgtcgtccacagcagaaaaaagcttgcccccggctcccctgaac
ataatccagccctcggagacgccggttgaggaagatgactttaagccccggcctatcatt
cccatgctttatgtggttccacggaccaaaaaggtggtgtttgacaaggagcgcatgtcc
tgccagcaggcgttcgagcagtttgcaacacaaaaaagtccaggctggcgggaacagacg
gtccctttggaaatccctgtgaaggaggaggagaacacggaagcaggaaatacagagatt
gctacagaggtcagtgatctacagaccgctgctttttcaaaaatgaagatggagataaag
aaaagtcgtcgtcatccactgggcaaacccccaacccgctccccgttgtcagttgttaaa
caggagacctcgagtgatgaggaaacgtttccattttctggggaggaagatatgagcgac
ccagaggctttgaaatctttactttcccttcagtggaagaataaagcacataatttccca
gctgaacgaaaattcaatgcagctgctgcactgagtgagccatactgtgctgtctgtacc
ctcttctacccatataaccagtctttacaggtggataaggaagctgccccagtctctgcg
ggggagaccacctccttcgtccacctttctaagtgcggacaaaagaccaagcctctgatc
ccagagatgtgctttacctcaagtggagaaaacacagagccccttccttcaaattcctat
attggagaagatggaaccagtcccttgatatcctgtgccaaatgctgcctgcaggttcat
gctagctgttatggaatacgtccagatttggtgaatgaaagctggtcttgctcacggtgc
tcagccaacgcatgggcagcggaatgttgcctgtgtaatctcaggggaggagctcttcag
atgaccactgatgggcggtggatccatataatctgtgctattgctgtccctgaggcccgt
tttctcaatgtaatagagcgtcatcctgtggatatcagcgctattccagagcagagatgg
aaactgaaatgcgtgtactgtcggaagcggatgaagaaagtgtctggtgcctgcatccag
tgttcctacgagcactgctccacttccttccacgtgacctgtgcgcacgcggctggcgta
cccatggagccggatgactggccctacgtcgtgtccatcacttgcttcaaacacaaagca
gctaaccagaatattccgtttcgaagggaagtgacccttggacagactgtgatcacaaag
aaccgaaatggactctactacagatgtaaagtgattggcacgacaacgcagactttctat
gaagtaaactttgatgatggttcatacagtgacaacgtttacccagaaagcattattagc
agagactgcatccaaatgggaccccctccagagggtgagatggttcagctgcagtggaca
gatggaatcgtctataaggccaagtttattgcagcccagatcagtcagatttatcaggtt
gagtttgaagatggttcccagctaatggtaaagcgtggtgatatttatactttggaggaa
gagcttccaaagagagtgaagtctcgcctgtccctcagcactggggcccctcaggaagat
gtattttcgggagatgaagtgagagcagccaagcgcccccggctggggaattcaagaaat
cctgaagaatatggacaaaacccagattacttggcctttatggagagcctgttgcagaca
cagtaccaacctggaactcagagcaacatgttttaa

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