Bucephala clangula (common goldeneye): 308453471
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Entry
308453471 CDS
T11949
Symbol
MED16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
bcla
Bucephala clangula (common goldeneye)
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcla03021
]
308453471 (MED16)
Transcription machinery [BR:
bcla03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
308453471 (MED16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
WD40_Prp19
DSE1_N
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
308453471
NCBI-ProteinID:
XP_080821706
LinkDB
All DBs
Position
28:complement(523931..533803)
Genome browser
AA seq
830 aa
AA seq
DB search
MDLAYVCEWERRPKSNHCPSIPLVCAWSCRNLIAFTTDLRNEEEKDLTHMVHIIDTEHPW
DVYSVNSGHAEVITCLEWDQSGSRLLSADADGHIKCWSMTDHLANSWENTVGSMVEGDPV
VALSWLHNGVKLALHVEKSGASNFGEKFSRVKFSPSLTLFGGKPMEGWIAVTISGLVTVS
LLKPNGQVLTSTESLCRLRCRVALADVAFTGGGNIVVATSDGSSTSPVQFYKVCVSVVNE
KCKIDTEILPSLFMRCTTDPARKDKYPAITHLKFLARDMSEQVLLCASNQNSSIVECWSL
RKEGLPVNNIFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVA
NDTKFFPGLGLALAFHDGSVHIVHRLSLQMMAVFYGSSSQRPVDEQTIKRQRTAGPLVHF
KAMQLSWTSLALAGIDSHGKLSMLRISPSMGHVLDMNTSLRHLLFLLEYCMVTGYDWWDI
LLHVQPNMVQNLVEKLHEEYMRQSAALQQVLSTRIVAMKASLCKLSSSTIARVCDYHAKL
FLIAISCTLKSLLRPHFLNTPDKSPGDRLTEICSKITDIDIDKVMINLKTEEFVLEMTTL
QSLQQLIQWVGDFVLYLLASLPNQGSPVRPGHSFLRDGASLGMFRELMVVIRIWGLLKPS
CLPVYTATSDTQDSMSLLFRLLTKLWLCCREENHITEPDDTLIDECCLLPSQLLIPNIDW
LPINDGIISKLQNKQLVRLQFGKAPGLVGHTVSSQFDAFVRAPGQPKIDHLRRLHLGAYP
TEECKSCTRCGCVTMLKSPNKVTAVKQWEQRWIKNCLCGGLWRRMPLSYS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggacctggcctacgtgtgcgagtgggagcggcggccgaagagcaaccactgcccgtcc
atcccgctggtgtgcgcctggtcctgccgcaacctcatcgccttcaccaccgacctccgc
aacgaggaggagaaggacctcacccacatggtgcacatcatcgacaccgagcacccctgg
gacgtctactccgtcaactccgggcacgccgaagtcatcacctgcttggagtgggaccag
tcgggctccaggctgctctccgcagacgcagacggccacatcaagtgctggagcatgacc
gaccacctggccaacagctgggagaacaccgtgggcagcatggtggagggagaccccgtc
gtggccctgtcctggctgcacaacggcgtgaagctggctctgcacgtggaaaagtccggg
gcatccaacttcggcgagaagttttcccgggtgaagttctcgccgtcgctgacgctgttc
ggtgggaagccgatggagggctggatcgccgtcaccatcagcgggctggtcaccgtctcc
ctgctcaagcccaacgggcaggtgctgacgtccacggagagcctgtgccggctgcgctgc
cgcgtcgccctggcggacgtcgccttcaccgggggggggaacatcgtggtggccacgtcg
gacggcagcagcacctcccccgtgcagttctacaaagtctgcgtcagcgtggtgaacgag
aagtgcaagatagacaccgagatcctgccgtccctcttcatgcgctgcaccacggaccct
gcccgcaaggacaagtacccagcgatcacccacctgaaattcctagctcgggacatgtcg
gagcaggtgttgctttgtgcctccaaccagaacagcagcatcgtggagtgctggtctctc
cggaaagagggcttgcctgtcaataacatcttccagcaaatctctcctgtggtcggagac
aagcagcccatgatactgaagtggcgaattctgtctgccaccaatgacttggatcgggtt
tcggctgtggcgctgccgaagttgcccatctccctaaccaacacggacctgaaggtagcg
aatgacaccaaattcttccctggactgggtctggctttggcttttcatgacggcagcgtc
cacatcgttcatcgcctctccctgcaaatgatggctgtcttctatggctcttcctcccag
cgccccgtggacgagcagactatcaagaggcagcgaactgctggtcccttagtgcacttc
aaagccatgcagctctcctggacgtctctggccttggctggcattgatagccacgggaag
ctgagcatgcttcgtatctccccttccatgggccacgtgctggacatgaacacgtccctg
cgtcacttgctgttcctgttggagtactgcatggtgactggctacgactggtgggacatc
ctgctccacgtccagcccaatatggtccagaacctggtggagaagctgcacgaagagtac
atgcgccagagcgcggccctgcagcaggtcctctccacgcgcattgttgccatgaaggca
tctctttgcaagctctcctccagcacgatagcccgtgtgtgtgactaccacgccaagctg
ttcctgattgccatcagctgcaccttgaagtcgctgctgcgcccgcacttcctcaacacc
ccggacaagagtcctggggaccgactcacagagatctgctccaagatcacagatatagac
attgacaaggtgatgatcaacctgaagacagaggagtttgtcctggagatgaccacgttg
cagtccctgcagcagctcattcagtgggtgggagactttgtgctctacctgctggccagc
ctgcctaaccagggctctcccgtgcggccgggccacagctttctgcgcgatggagcgtcc
ttgggcatgttcagggagctgatggtggtgatccgtatctgggggctgttaaagccaagc
tgcctccctgtctacacagcaacctccgacacccaggacagcatgtccctcctcttcagg
cttctaacgaaactctggctgtgctgtcgtgaggaaaatcacataacagagccagatgat
accctgatagatgaatgctgcctcctgcccagccagttgctcattcccaatattgactgg
ttgcctatcaacgatggcattatcagcaagctgcagaacaaacagcttgtccggctgcag
tttggaaaagctcctgggctcgttggtcacactgtctcttcccagtttgatgcctttgta
agggcacctggacagcccaaaattgatcatctgagaaggctccatttaggagcatacccc
acagaagaatgcaagtcatgtaccaggtgtggctgtgttaccatgctgaaatcgcccaac
aaagtcacagcggtgaagcagtgggagcagcgctggatcaagaactgcttgtgtgggggg
ctgtggaggaggatgcctctcagctattcctga
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