Bucephala clangula (common goldeneye): 308453708
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Entry
308453708 CDS
T11949
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
bcla
Bucephala clangula (common goldeneye)
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcla03019
]
308453708 (TIA1)
03041 Spliceosome [BR:
bcla03041
]
308453708 (TIA1)
Messenger RNA biogenesis [BR:
bcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
308453708 (TIA1)
Spliceosome [BR:
bcla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
308453708 (TIA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
RRM_ACIN1
RRM_3
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
308453708
NCBI-ProteinID:
XP_080822013
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All DBs
Position
29:4216169..4231862
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AA seq
383 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVNTLRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMISPVQQNQIG
YPQAYGQWGQWYGNAQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTQSSAAWMGANYGVQP
PQGQNGSVITNQTGYRMAGFETQ
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaaatgcccaaaaccctatatgtggggaacctgtcaagagatgtgaccgaa
gctctcatcctccagctgttcagccagattggaccatgcaaaaactgcaaaatgatcatg
gatacagctggaaacgatccctattgtttcgtggagttctacgagcatcgccacgcggct
gcagcgctcgctgctatgaatggccggaagataatgggtaaggaggtgaaagtgaactgg
gcaacaacccccagcagccagaagaaagatacgagcagtagtaccgttgtcaacacactg
cgttcacaagaccatttccatgtctttgttggagacctcagtccagaaatcacaactgaa
gatattaaagcagcttttgcgccatttggaagaatatcggatgcgcgtgtggttaaggac
atggcaacgggaaaatccaaaggctatggcttcgtttccttcttcaataaatgggatgca
gagaatgctattcagcagatgggtggccagtggctcggtggaaggcaaatcagaacaaac
tgggcaacaaggaaacctccggctccaaagagtacctacgaatcaaacaccaaacagctg
tcttacgacgacgtggtcaatcagtccagcccgagcaattgcactgtgtactgcgggggt
gtgacttcgggactgacagaacagctaatgcgccagaccttctctccgttcgggcagata
atggaaatccgagtcttccccgataaaggatactcctttgtgcggtttaattctcacgag
agcgctgcacacgcgatcgtttctgtcaacggaacaactatagaagggcacgtggtgaag
tgctactggggcaaggaaacaccagacatgatcagtccggtccagcagaatcaaatcggc
tacccgcaggcgtacgggcagtggggccagtggtacggcaacgcgcagatcggtcagtac
atgcccaacggctggcaggtcccggcgtacgggatgtacgggcaggcgtggaaccagcag
ggcttcaaccagacgcagtcttcggcagcgtggatgggggcgaactacggcgttcagcca
ccgcaggggcagaacgggagcgtgatcaccaaccaaactggataccgcatggcaggcttc
gaaacgcagtga
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