Bucephala clangula (common goldeneye): 308453957
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Entry
308453957 CDS
T11949
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
bcla Bucephala clangula (common goldeneye)
Pathway
bcla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
308453957 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bcla04040
]
308453957 (SCN8A)
Ion channels [BR:
bcla04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
308453957 (SCN8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
ATP-synt_B
FraC
IQ
Motif
Other DBs
NCBI-GeneID:
308453957
NCBI-ProteinID:
XP_080822362
LinkDB
All DBs
Position
30:3366601..3420504
Genome browser
AA seq
1988 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIEKRIAEEKKKKRPKQDSSHRDDDEDSKPKPNSDLE
AGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNL
FRRIAIKILIHSLFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETFLDNGSRGF
DWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISK
VSSKSAKERRNRRKKRKDKELSEGEEKGDAEKVFKSESEDGMRRKAFRLPDNRIGRKFSI
MNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIP
IRGRDRRSSYSGYSGYSQGSRSSRIFPNLRRNVKRNSTVDCNGVVSLIGGPPSSMPGGRL
LPEVKIDKAAPDDSGTTEIEIKKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEE
LEESQRKCPPCWYKFANTFLIWECHPHWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMA
MEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLME
LGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAV
VGMQLFGKSYKECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQA
MCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWI
KAKVREFMHTHFKQRGGDEVKPLDELYDKKVNCIANHTGADINRDIDYQKNGNGTTSGIG
SSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDDTSS
SEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTC
FLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKW
CAYGFVKFFTNAWCWLDFLIVAVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFE
GMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEERFEIDIVN
NKTDCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQ
PKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKISQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMED
ILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVS
PTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN
FAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGF
KGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIW
EKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFT
KRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVMQRAYRARLAR
RGFISRRPVPTKLENGGTNREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRREKAKRQ
KDVRESKC
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacggctgctcgcaccaccaggccccgatagttttaaacctttcactccggag
tctctggctaacattgagaaacgcattgcagaagaaaaaaagaagaagcgtccaaagcaa
gacagcagccaccgggatgatgatgaagacagcaaaccaaaaccaaacagtgaccttgag
gcagggaagaatttgcctttcatctacggggacatccctaaaggcctggttgctgtacca
ctggaggactttgacccttattatatgacccagaaaacctttgtagtactaaacagaggg
aaaacactcttccgatttagtgccacacctgccttgtacattttaagtccttttaatctg
tttagaagaatagctattaaaattttgatacattcattatttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaacccgcctgaatggtcgaagaat
gtggagtatacattcactggtatttatacatttgaatcacttgtgaaaattattgcaaga
ggtttctgtatagatggctttactttcctacgtgatccatggaactggctagatttcagt
gtgatcatgatggcatatgtcacagagtttgtggaccttgggaatgtctcagcattgaga
actttcagagttctccgagctttgaaaactatctctgttattccaggcttgaagaccatt
gtgggtgccctaattcagtctgtgaagaagctgtcagatgtaatgatcttgacagtattt
tgtctcagtgtctttgctctgatcgggttgcagctgtttatgggcaatttgaggaacaag
tgtgtgatatggccaattaatgtgaatgagacgttcctggataacggctccaggggcttt
gactgggaggaatacaccaacaatatgtcaaatttttacataattcctggtgcccctgat
cctttgctctgtggtaacagctcagatgcaggtcaatgtccagagggctacacatgcatg
aaagcaggacggaacccgaactatggttacacaagctttgacactttcagctgggctttt
ctggctttgtttcgccttatgactcaggacttttgggaaaacttgtatcaattaacctta
cgagcagcaggaaaaacctacatgatcttcttcgtcttggtgatctttgtgggatcgttc
tatctggtaaacctaattttggctgtggtggctatggcttatgaagagcagaaccaggcc
acgttggaggaggcagagcagaaagaggcagaatttaaggccatgttagaacaattgaaa
aagcagcaggaagaagcacaggctgctgctatggtcacttcggcagggacagtctccgag
gatgctgtggaagatgatggtggggggaggatgtctcggagctcctcggagatttccaaa
gtcagttccaagagtgccaaggagcgtcgaaaccggaggaaaaaacggaaggacaaagag
ctgtcagaaggagaggagaagggtgatgctgaaaaggtgttcaagtctgaatcggaggat
ggcatgagaaggaaagcgttcaggctacccgataacaggataggaaggaagttttccatc
atgaaccagtctctcctcagcatcccaggctccccttttctctcccggcacaatagcaag
agcagcatcttcagctacaaagggcgatttcgtgacccaggttcggagaatgagtttgct
gatgacgagcacagcacggtggaggagagcgaaggcaggagagactccctcttcatcccc
atccgtggccgtgaccgaaggagcagctacagcggctacagcggctacagccaaggcagc
cggtcctcgcggattttccccaacctccgccgaaacgtgaagaggaacagcacggtggat
tgtaacggcgtggtgtccctcattggcggcccaccttccagcatgcctgggggacgcctt
ctgcctgaggtgaaaatagataaggcagctcctgatgacagcggtaccactgaaatagaa
attaaaaagaaacctggtgggtctctcttggtctcgatggatcaggtgaatgcctcctat
ggaagaaaggatcgaaccaacagtgtaatgaccggcttgacaaatacccttgttgaggag
ctggaagagtcccagaggaagtgtcccccttgctggtacaaatttgccaacacgttcttg
atctgggaatgccacccgcactggatcaagctgaaggagatcgtgaacttaattgtcatg
gatccttttgttgacctggccatcaccatctgtattgtgctgaacactctgttcatggca
atggagcaccatcccatgacccccgagtttgaacatgtgctctccgtaggaaatctggtt
ttcactggaattttcacagcagaaatgttcctgaagcttatcgccatggatccctactat
tatttccaagaaggctggaacatctttgatggatttattgtctccctcagtttaatggaa
ctgggtctagcaaacgtggaaggactttccgtgctgcgatctttccgattgctgagagtc
ttcaaactggccaagtcttggcccactctgaatatgctgataaaaatcatcggtaactcg
gtgggtgctttggggaacctgaccttggtgctagccatcatcgtgttcatctttgcggtg
gtgggcatgcagctcttcggcaaaagctacaaggagtgtgtctgcaagatcaatccggag
tgtgagctaccccgctggcacatgcacgatttcttccactccttccttattgtcttccgt
gtgttgtgtggggaatggattgagaccatgtgggattgtatggaggtggcaggacaggcc
atgtgcttgattgtcttcatgatggtcatggtcatcggaaatttagtggtgctgaaccta
ttcttggccttgctactgagctccttcagcgcagacaatctggcagccacagatgatgat
ggggagatgaacaacctgcagatttctgtcattcgcatcaagaagggcattgcctggatc
aaggcgaaagtgcgtgaattcatgcacactcatttcaagcagagagggggagatgaggtc
aaacccttggatgaattgtatgacaagaaggtgaactgcattgctaaccacacaggggct
gatatcaacagagacattgattatcagaagaatggcaatggcacgacaagtggaattggg
agcagcgtggagaagtacataatagatgaagatcacatgtccttcatcaataaccccaat
ctcactgtccgggtacctattgctgtaggagaatcagattttgaaaatctcaacacagaa
gatttcagcagtgatacagatccagatggcagcaaagagaaactggatgataccagctcc
tctgaaggtagcaccattgatataaaacctgaggtggaagaagtccctgtggaggcccca
gaggagtacctggacccagatgcgtgtttcacagaaggttgcatgcagcgctgtaaatgt
tgtcaggtcaatattgaggaagggctgggaaagtcttggtggaccttgaggaagacgtgt
tttctgattgtggaacataactggtttgagactttcatcatctttatgatcctactgagc
agtggtgctctggcttttgaggatatttacatagaacagaggaaaaccatccggaccatc
ctggagtatgcggacaaggtcttcacttacattttcatcctggagatgttgctgaaatgg
tgcgcctatggattcgtcaagttcttcactaatgcctggtgctggctggatttcctcatt
gtggctgtctctttagtcagccttgtagctaatgccctgggctactcggaactaggtgcc
ataaagtcccttaggacactaagagctttgaggcctttaagagcgttgtcccgatttgag
gggatgagggtggttgtcaatgccttggttggcgctatcccttccattatgaatgtgttg
ttggtctgccttatcttctggctgattttcagcattatgggggttaacctgtttgccggg
aaatatcattactgctttaatgaaacatccgaggagcgctttgaaatagatattgttaac
aacaagacagactgcgaagccctgatgccgcccaactccactgagattcgatggaagaat
gtgaaaatcaacttcgacaacgttggggcaggatacctggctctcctgcaagttgccact
ttcaagggctggatggacatcatgtatgcagcagtagattccagaaagcaagaagagcaa
cccaagtacgaggacaacatttacatgtacatatattttgttatcttcatcatctttggc
tcctttttcaccctgaacttgttcattggtgtcatcattgacaacttcaatcaacaaaag
aaaaagataagtcaagatattttcatgacagaagaacaaaagaagtactataatgccatg
aaaaaactgggctcaaagaaacctcaaaagcctattccccgacctctgaaccgtattcag
ggagctgtctttgactttgtaactcagcaagcttttgatatagtcatcatgatgctcatc
tgcctcaacatggtgaccatgatggtggagacagacacacaaagcaagcagatggaggac
atcctttactggatcaacctggtgtttgtcatcttcttcacctgtgagtgtgtgctgaag
atgttcgccttgcggcactattatttcaccatcgggtggaacatttttgacttcgtggtt
gtgattctgtccattgtgggaatgttcctggctgaaatcattgagaagtattttgtatca
cccacgctcttccgagtcatccgactggctcgtattggacgtatcctgcgtttgatcaaa
ggagccaaaggaatccgcaccttgctttttgccttaatgatgtctttgcccgccttgttc
aacatcggcctcttgctgttcttggtcatgttcatcttctccatcttcggcatgtcaaac
tttgcctacgtcaagcatgaggctggcatagatgatatgttcaacttcgagacctttggc
aacagcatgatctgcttgttccagatcaccacatcggctggctgggatggcctgctgctg
cccatcctaaaccggcctccagactgcgatctagacaaggagcatcccgggagtggtttt
aagggggattgtgggaacccttcggtggggatttttttctttgtgagttacatcatcatc
tccttcctgatcgtggtcaacatgtacattgccatcatcctggagaacttcagtgtggcg
acagaggagagtgcggatccgctgagtgaggatgactttgaaactttctacgagatttgg
gagaagttcgatcccgacgccacgcagttcatagagtacagcaagctcgcggactttgct
gatgctttggaacatcctctccgggtccccaaacccaacaccattgaactcattgccatg
gacctgcctatggtaagtggagacaggatccactgtttagacatcctgtttgccttcacc
aaacgtgtcctgggggacagtggagagctggatatactgagacaacagatggaggaaaga
tttgtggcatccaacccttccaaagtgtcttatgagcccatcacaactacgctgcggcgt
aagcaggaagaagtctcagcagtggttatgcagagggcttacagggctcgtttagccaga
cgggggtttattagccgaaggcctgtccccacaaaactggaaaacggaggaacaaacagg
gagaaaaaagaaggcaccccatccacggcatctctcccgtcatatgacagtgtgactaaa
cctgagaaggagaaacaacaacgggcagaggaaggaagacgagaaaaggcaaaaagacaa
aaagatgtcagggaatccaagtgttga
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