Bucephala clangula (common goldeneye): 308454229
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Entry
308454229 CDS
T11949
Symbol
THBS3
Name
(RefSeq) thrombospondin-3
KO
K04659
thrombospondin 2/3/4/5
Organism
bcla Bucephala clangula (common goldeneye)
Pathway
bcla04145
Phagocytosis
bcla04510
Focal adhesion
bcla04512
ECM-receptor interaction
bcla04518
Integrin signaling
bcla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
308454229 (THBS3)
04518 Integrin signaling
308454229 (THBS3)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
308454229 (THBS3)
09144 Cellular community - eukaryotes
04510 Focal adhesion
308454229 (THBS3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
308454229 (THBS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bcla04131
]
308454229 (THBS3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bcla04147
]
308454229 (THBS3)
00536 Glycosaminoglycan binding proteins [BR:
bcla00536
]
308454229 (THBS3)
Membrane trafficking [BR:
bcla04131
]
Endocytosis
Phagocytosis
Opsonins
308454229 (THBS3)
Exosome [BR:
bcla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
308454229 (THBS3)
Exosomal proteins of colorectal cancer cells
308454229 (THBS3)
Exosomal proteins of bladder cancer cells
308454229 (THBS3)
Glycosaminoglycan binding proteins [BR:
bcla00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
308454229 (THBS3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
cEGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
308454229
NCBI-ProteinID:
XP_080822783
LinkDB
All DBs
Position
31:442654..452744
Genome browser
AA seq
1167 aa
AA seq
DB search
MPLSRLQVAWLRSLLSGQGSGAGPGGSAARGAPPGPGGWDPTARHPWPSGSSSATPRPPC
CPRGSPCPSLPGRTLRRCRGRSGSQRGGPRLPDLPVNRRLPHSISVSGSRAGAGSAEVPG
GRSQLRALPPAGPGAPRPAPPRPAPLLSAWRGCGRPAAAERPPGSPGCASVIDGSLFPPR
RQRRPLPARATPPRRAPLRTGGTGGMGAPAAAGDPALGALLALLLLGAAGAARQGLQVID
LLLVSEARQMASITHKIRMELLTVNDVFLLSTFRLPPKQGGTLFGLYSKKDNTRWLEVSV
VGKINKVLVRYLREDNKLHSVNLQHAHVADGQSHTVIVRLSGLRGDMLSVELYVDCKQVD
SSVGLPELSEIPLAEVESIEVRTGQKAYQRMQGFVESMKLILGGSMSRVGALSECPFQGD
ESIHSAVTSALASILGEQTKALVTQLTLFNRILTDLREDIRDQVKEMSLIRNTIMECQVC
GFHEHRSRCNPNPCFSGVDCMETYEYPGYRCGPCPPGLEGNGTHCADIDECAHANPCFPG
SKCINTAPGFRCEPCPRGYRGNTVSGVGADYAKASKQVCTDIDECNDGNNGGCDPNSICT
NTLGSYKCGPCKSGFVGNQTSGCIPQRSCSTPTSNPCDINGFCMFERNGEISCACNVGWA
GNGNVCGQDTDLDGYPDEPLPCIDNNKHCKQDNCRLTPNSGQEDADNDGIGDQCDDDADG
DGIKNVEDNCRLFPNKDQQNSDTDSFGDACDNCPNVPNNDQRDTDSNGEGDACDNDIDGD
GIPNMLDNCPKVPNPLQTDRDEDSVGDACDSCPEMSNPTQTDMDSDLVGDICDTNEDSDG
DGHQDTKDNCAEIPNSSQLDSDNDGLGDDCDNDDDNDGIPDYTAPGPDNCRLIPNPNQKD
SDGNGVGDACEEDFDNDTVIDQLDVCPESAEVTLTDFRAYQTVILDPEGDAQIDPNWVVL
NQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFIFSYQDSASFYVVMW
KQTEQTYWQATPFRAVAEPGLQLKAVKSSTGPGEHLRNALWHTGHTPEHVRLLWKDPRNV
GWRDKTSYRWQLVHRPQVGYIRVRLYEGPRLVADSGVIIDTTMRGGRLGVFCFSQENIIW
SNLQYRCNDSIPADFEPFRRFLLEGRE
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgagccggctccaggtggcctggctccgctcgctcctctccggccaggggagc
ggggccggccccggaggctccgctgcccggggggcgccgcctggccccgggggctgggac
cccaccgcgaggcacccttggccaagcggctcctcctcggccaccccccgtcccccgtgc
tgtccccgcggctccccgtgcccgtctctcccgggccggacgcttcggcgctgccggggc
cgctccggctcccagcgaggcggccccagactgcctgacctcccggtgaaccggcgcctg
ccacactcaatttctgtgagcgggagccgtgcaggggcgggcagcgccgaggtgcccggg
ggtcgctcgcagctccgggccctgccgccggccggtcccggtgcaccgcgccccgccccg
ccccgccccgctccgctcctctccgcttggcggggctgcggccggcccgccgcggcggag
cgcccgccggggtccccgggatgcgcgtccgtgattgacggctctttgtttcctcctcgc
cgccagcgccggcccctccccgctcgcgccactccgccccgccgcgctccgctccgcacc
ggcggcaccggcggcatgggggcaccggcggccgcgggggacccggcgctcggcgcgctc
ctggcgctgctcctgctgggcgccgccggcgcggctcgccaggggctgcaagtcatcgac
ctgctcctggtgagcgaggcccggcagatggccagcatcacacacaagatccggatggag
ctcctgacggtgaacgacgttttcctcctctccaccttccgcctgccccccaagcagggg
gggaccctcttcggcctctactccaaaaaggacaacacgaggtggctggaggtgtccgtg
gtggggaagatcaacaaggtgctggtgcgctacctgcgggaggacaacaagctgcactcg
gtcaacctgcagcacgcgcacgtggcggacgggcagagtcacacggtgatcgttcgcctg
agcgggctgcgcggggacatgctgagcgtggagctctacgtggactgcaagcaagtggac
tccagcgtggggctgcccgagctgtccgagatccccctggcagaggtggagtcgatcgag
gtgcgcacaggacagaaggcctaccagaggatgcaggggtttgtggagtccatgaagctg
attctgggaggctccatgagccgagttggggcgctgagcgagtgtccgttccagggagat
gaatccattcacagcgcagtgacaagtgcattggcctccatcctgggcgagcagaccaag
gcgctggtcacgcagctgaccctcttcaaccgcatcctgacagacctgcgagaagacatt
agagaccaggtgaaggagatgtccctgatccgcaacaccatcatggagtgccaggtctgc
ggtttccacgagcaccgttctcgctgcaaccccaacccctgcttcagcggcgtggactgc
atggagacgtacgagtaccccgggtaccgctgcgggccctgcccgccaggcctggagggc
aatggcacacactgcgccgacattgatgagtgcgctcatgccaacccctgcttccccggc
tcgaagtgcatcaacacggcacccggcttccgctgtgagccctgtccccgtggctatcgg
ggcaacaccgtctctggcgtgggggctgactacgcaaaggccagcaagcaggtttgcaca
gatattgatgaatgcaacgatgggaacaacggtggctgtgaccccaactccatctgcacc
aacacgttgggctcctacaaatgtggcccctgcaagtcagggtttgtggggaatcagacg
tccggctgcatcccgcagcggtcctgcagcactcccacctccaacccttgcgacatcaac
ggcttctgcatgttcgagaggaacggtgaaatttcctgtgcgtgcaacgtgggctgggct
ggcaacggcaatgtgtgcgggcaagacacagaccttgacggctaccccgatgagcccctg
ccctgcatcgacaacaacaagcactgcaagcaggacaactgccgcctgacgccgaattca
gggcaggaggacgccgacaatgatggcatcggggaccagtgtgacgatgacgccgatggt
gatggcatcaagaacgtggaggacaactgccggctcttccccaacaaagaccagcagaat
tcagacactgactcctttggggatgcctgtgacaactgccccaacgtgcccaataatgac
cagcgggacacggacagcaacggcgagggggacgcttgtgacaatgacatcgatggggat
ggaattcccaacatgctggataactgccccaaggtgcccaacccgctgcagacagaccgg
gacgaggacagtgttggggatgcctgtgacagttgccctgaaatgagcaacccaactcag
acagatatggacagtgacctggtaggggacatctgtgacaccaatgaggacagtgatggg
gacgggcaccaggacaccaaggacaactgcgctgagatccccaacagctcccagctggac
tcagacaacgacgggctgggggacgactgtgacaacgatgatgataacgacggcatccct
gactacacagcacccggcccggataactgccgtctgatccccaaccccaaccagaaggat
tcggatgggaacggcgtgggcgacgcgtgcgaggaggacttcgacaatgacacggtgatc
gaccagctggatgtgtgcccggagagcgccgaggtgacgctgaccgacttccgcgcctac
cagaccgtcatcctggaccccgagggggatgcgcagattgatcccaactgggttgtcctc
aaccagggcatggagattgtgcagaccatgaacagtgacccgggcttggctgttggctac
acggctttcaacggggtggactttgagggcaccttccacgtcaacaccgtcaccgatgat
gactacgccggcttcatcttcagctaccaggacagcgccagcttctatgtggtgatgtgg
aagcagacggagcagacgtactggcaggccacccccttccgcgccgtggccgagccgggg
ctgcagctcaaggcggtgaagtcctccacgggccccggggagcacctgcgcaacgccctg
tggcacacgggccacacgcccgagcacgtccgcctgctgtggaaggacccccgcaacgtg
ggctggagggataagacctcgtaccgctggcagctggtgcacaggccccaggtgggctac
atcagggtccggctgtacgaaggcccgcggctggtggcagactcgggggtgatcatcgac
accaccatgcgcggggggcggctgggggtcttctgcttctcccaggagaacatcatctgg
tccaacctgcagtaccgctgcaacgactcgatccccgcagacttcgagcccttccgccgg
ttcctgctggagggccgcgagtga
DBGET
integrated database retrieval system
