Bucephala clangula (common goldeneye): 308454397
Help
Entry
308454397 CDS
T11949
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting-associated protein 45 isoform 1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
bcla Bucephala clangula (common goldeneye)
Pathway
bcla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
308454397 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bcla04131
]
308454397 (VPS45)
Membrane trafficking [BR:
bcla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
308454397 (VPS45)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
308454397
NCBI-ProteinID:
XP_080823018
LinkDB
All DBs
Position
31:complement(2341971..2363162)
Genome browser
AA seq
570 aa
AA seq
DB search
MNAVLAVKQYVAKMIEDSGPGMKVLLMDRETTGVVSMVYTQSEILQKEVYLFERIDSFNR
EPMKHLKAICFLRPTKENVEYLIQELRRPKYSIYFIYFSNVISKSDIKSLAEADEQEVVA
EVQEFYGDYIAVNPHVFSLNLLGCCQGRNWDPAQLARTTQGLTALLLSLKKCPMIRYQLS
SEPAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKRKPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVAERNLLEVSEVEQELACQ
NDHSSALQNVRRLLQNPKVTELDAARLVMLYALHYERHSSNSLPGLLADLRSRGVSDKYR
KLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPLLQETLDQLIKG
KLKDSQFPYLGPNTLRDRPQDIIVFIIGGATYEEALAVYNLNRTNPGVRIVLGGTTIHNT
KSFLEEVTAAGFRGRSAESSQAPPRPSSRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggtgctggcggtgaagcagtacgtggcgaaaatgatcgaggacagcgggccg
ggcatgaaggtgctgctgatggaccgcgagacgactggcgtggtgagcatggtgtacacg
cagtcagagatcctgcagaaggaggtgtacctcttcgagcgcatcgactccttcaacagg
gagccgatgaagcacctgaaggccatttgcttcctgcgccccaccaaggagaacgtggaa
tatctcattcaggagctgcggaggccgaagtacagcatctattttatctatttcagcaac
gtgatcagcaagagtgacatcaagtccttagctgaggctgatgagcaggaagtcgtggca
gaagtccaggagttctacggagattacatcgctgtgaatccccacgttttttctctcaac
ctcttgggctgctgccagggccgcaactgggatccagcccagctggccaggacgacccaa
gggctgactgctctgctgctgtccctgaagaaatgccccatgattcgctaccagctctct
tccgagccggcgaagaggcttgccgagtgcgtgaagcaagtgatcactaaggaatacgag
ctgtttgactttcggcgcacggaggttcctccgctgctcctcatcctggaccgctccgac
gatgccatcaccccgctgctgaaccagtggacgtaccaggccatggttcatgagctgctg
gggatcaacaacaaccgcatcgacctctctcgcgtgccaggcataagcaaggatctccgg
gaggtggtcctgtcggctgagaacgacgagttctacgccaacaacatgtacctgaacttc
gccgagattggcagcaacatcaagaacctcatggaggatttccagaagaggaaacccaag
gagcagcagaagctggaatccatcgcggatatgaaggcgtttgtggagaactacccgcag
ttcaagaagatgtccggcacggtgtcgaagcacgtgacggtggtgggcgagctctcccgc
ctggtggccgagcgcaacctgctggaggtgtcggaggtggagcaggagctggcctgccaa
aacgaccactccagcgccctgcagaacgtgcggcgcctgctgcagaaccccaaggtgacg
gagctcgacgccgcgcggctggtgatgctctacgccctgcactacgagcgccacagcagc
aacagcctgccggggctgctggcggacctgaggagcagaggggtgtcagacaaataccga
aagctggtgtctgctgttgtggagtacggagggaaacgggtccggggcagcgacctgttc
agtcccaaggacgctgtggccatcaccaagcagttcctcaaaggtctgaagggcgttgag
aatgtgtatacccagcaccagcctctcctgcaagaaacgctagaccagctcatcaaaggg
aaactcaaggacagccagttcccctacctggggcccaacactctccgggacaggccccag
gacatcatcgtcttcatcatcggaggggcgacctacgaagaggcgctggccgtctacaac
ctgaaccgcaccaacccgggggtgcgcatcgtcctggggggcaccaccatccacaacacc
aaaagcttcctggaggaggttacggctgcagggttccgtggccgaagcgccgagagctcg
caagcgccgccgaggccaagcagcagacgatga
DBGET
integrated database retrieval system
