Bucephala clangula (common goldeneye): 308456709
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Entry
308456709 CDS
T11949
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6 [EC:3.6.4.-]
Organism
bcla
Bucephala clangula (common goldeneye)
Pathway
bcla04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
bcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
308456709 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bcla04131
]
308456709 (PEX6)
Membrane trafficking [BR:
bcla04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
308456709 (PEX6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DPBB_PEX6
PEX6_vert_N
AAA_16
AAA_lid_3
AAA_5
AAA_22
Mg_chelatase
nSTAND3
AAA_25
Vps4_C
PEX6_4th
RuvB_N
RNA_helicase
NPHP3_N
AAA_33
DUF815
TIP49
Parvo_NS1
bpMoxR
AAA_28
IstB_IS21
AAA_14
AAA_24
Motif
Other DBs
NCBI-GeneID:
308456709
NCBI-ProteinID:
XP_080825275
LinkDB
All DBs
Position
2:13821118..13836149
Genome browser
AA seq
989 aa
AA seq
DB search
MAVAVLRPLDAPPAELAPVTALLLAPEPLCAALRGRAGAGSSGGGGGGGGGLVLAVRPAG
RGGAQAVLLSAVALEAAGRRGAELWLRGALLRRLGLAAGRRVAVWPLRRPPPLAWVLLAA
AAGGGGGRPAGGAVLARRGEALPGAGPGPGPLVLEARPALQGLLGSGTRVALAAPPPPPG
GGVASWRRPAAPPLVSRFAAGPRAAEGPRLKAAPPGGGAGGGAEVWVSRRGLLALGLFHG
EWVRVRAEGEARQHLAALLARPPAWEYPRAARRKPPDGTVLLAPALAFNLGCDPAGGGLL
CLQRYEGKAGAAEGKGSQSLLSVPPFAKELHVEIVCSPAYSARGVYDRILYKHFETPRLV
QEGDILCVPTFGHAEFLDVNADKFLRWPELYFKVRKILGMVEGEQSEGYLADTQNTSLYL
VGSTNSAVPSAPAYNSHEFWSSLSPAGLSDVVKDLCDALRPHLNSQATTLSRIGSVLLSG
PSGSGKLMAVRAACSCLNLHLFKVDCVSLCGDTSGATEEKIQVAFAQAQQFRPCVLLLKD
VELLGRDRDMLGEDARVIATLRQLLLDQDPALSHPVLVIGTTCRPRDVPTDVQTAFLHEV
KMEALSEEQRRAMLSVLTASLPLGKEVNLAKLARRTAGFVLGDFCALLSHSSRAACTRIQ
ALSFPGGLSEEVERDFCTAGFPVLEEDFSVALDQLHDAHSQAVGAPKIPSVSWQDVGGLH
EVKKEILDTIQLPLEHPELLSLGLCRSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGP
ELINMYVGQSEENVRNVFARARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLA
ELDGLHSSREVFVIGATNRPDLLDPALLRPGRFDKLVYVGINEDRESQLQVLSAVTRKFK
LDPSVNLSSILEKCPAQLTGADIYALCSDAMMCAVKRKVEWIEEGLDTESSALILTMEDF
LQAAARLQPSVSEQELLRYRHIQQKFAAC
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgctgcggccgctggacgctcccccggccgagctggcgccggtgacg
gcgctgctgctggccccggagccgctgtgcgcggcgctgcggggccgggccggcgctggg
agcagcggcggaggcggaggaggaggcggcggcctggtgctggccgtgcggccggcgggg
cgcggcggggcgcaggccgtgctgctgagcgctgtggcgctggaggcggcggggcgccgg
ggggccgagctgtggctccgcggggcgctgctgcgccgcttggggctggcggcgggccgc
agggtggccgtgtggccgctgcgccgccccccgccgctcgcctgggtgctgctggcggcg
gcggcggggggcggaggggggaggccggcggggggcgcggtgctggcgaggaggggcgag
gccttgccgggagccggccccgggcccggcccgctggtgctggaggctcggccggcgctg
caggggctgctgggcagcggcacccgcgtcgcgctcgcggcccctccgccgccgcccggt
ggtggtgtcgcctcctggcgtcgccccgcggcgccgccgctcgtgtcccgcttcgccgcc
ggcccccgggctgctgaggggccgcggttgaaggctgcgccccccggtggtggcgccggc
ggaggggcggaggtgtgggtgagccggcgcgggctgctggccctggggctgttccacggg
gagtgggtgcgggtgcgagcagagggggaggctcggcagcacctggcggcgctgctggct
cgcccgcccgcctgggagtacccgcgggctgcccgcagaaagccccccgatggcaccgtg
ctgctggcaccagcccttgccttcaacctgggctgtgatcctgccggcggtgggctcctc
tgtctgcagaggtacgaaggaaaggctggtgctgcggaggggaaaggaagccagtccttg
ctgtccgtgccgcccttcgccaaggagctgcacgtagagatcgtctgctcgccagcctac
agtgccagaggagtctatgaccgtattctctacaagcactttgaaacaccccggcttgtc
caggagggagacatcctgtgtgttccaacgtttgggcatgctgagtttttagatgtaaat
gcagacaaattccttaggtggccagagctgtacttcaaagtgaggaagattttaggcatg
gtggaaggcgagcagtctgagggttacctggcggacacgcagaacacctctttgtatctg
gtgggctcaacaaacagtgctgtcccatctgccccagcctataacagtcacgagttctgg
agcagcttgtctcctgccggactctctgacgttgtgaaggatctctgcgatgcacttcgg
cctcacctgaacagtcaggcaaccacgctcagcaggattggcagcgttctcctctcagga
ccaagcggcagtgggaagctgatggctgtcagagctgcgtgtagctgcctcaacctccac
ctcttcaaggtggattgcgtgagcttgtgcggtgacaccagtggagccacggaggagaaa
atacaggtggccttcgcccaggcccagcagttccgtccctgcgtgcttctgctgaaagac
gtagagctgctgggcagggaccgggacatgctgggagaggacgccagggtcatcgctact
ctgcgccagctgcttctggatcaagacccagcactgagccaccctgtcctggtgatcggc
acaacctgcaggccccgggatgttcccacagatgtgcagaccgctttccttcatgaggtg
aagatggaagccctttccgaggagcagcggagggcgatgctgagcgtgctgaccgccagt
cttcctctgggcaaagaagtgaacctcgccaagctggcccgcaggactgcaggttttgtg
ctgggggatttctgtgccttgctgtcccacagcagccgggctgcctgtacccgcatccag
gccttgagtttcccgggtggactgagtgaggaagtggagagagatttttgcactgctggc
ttcccagtgcttgaggaggatttcagcgttgctctggaccagctgcacgatgcccactcg
caggcagtgggtgccccaaagatcccctccgtgtcctggcaggatgttggtgggctccat
gaggtgaagaaggagatcctggacacaatccagttgcccctggagcacccagaactgctc
tctctgggtctgtgccgctctggtctgctgctgtacgggcctcctgggacagggaagacc
ttgctggcaaaagccgtggcaaccacgtgcaccatgaccttccttagcgtgaaggggccg
gagctcatcaacatgtacgtggggcagagcgaggagaacgtgcgtaacgtgtttgccaga
gcccgggcagctgctccctgcatcatcttctttgacgaactggattccctggccccaaat
cgtgggcggagtggagactctgggggtgtcatggacagagttgtctcgcagctcctggct
gagctcgacggccttcattccagccgagaggtgtttgtcattggagccaccaacaggcct
gacctcctggaccccgcgctgctccggccgggcaggtttgacaagctggtatatgtgggc
ataaatgaagaccgggagtcccagctgcaggtgctgagtgcagtcaccaggaagtttaaa
ctggatccttccgtgaatctcagcagcatcctagaaaaatgcccggctcagctgacagga
gcagacatctacgcgctgtgctcggatgccatgatgtgcgctgtcaaacgcaaggtggaa
tggatcgaggaagggctggacacagagagctctgctctcatcctgaccatggaagacttc
ctgcaggctgctgcgaggctgcagccgtcggtgtctgagcaggagctgctcaggtacaga
cacatccagcagaagtttgctgcctgctga
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