Burkholderia orbicola: Bcenmc03_0321
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Entry
Bcenmc03_0321 CDS
T00669
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bcm
Burkholderia orbicola
Pathway
bcm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bcenmc03_0321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcm03019
]
Bcenmc03_0321
03400 DNA repair and recombination proteins [BR:
bcm03400
]
Bcenmc03_0321
Enzymes [BR:
bcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bcenmc03_0321
Messenger RNA biogenesis [BR:
bcm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bcenmc03_0321
DNA repair and recombination proteins [BR:
bcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bcenmc03_0321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACA89501
UniProt:
B1JU16
LinkDB
All DBs
Position
1:366450..368297
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AA seq
615 aa
AA seq
DB search
MSRALEILDEVFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQ
GAGIVVSPLIALMQDQVAALSEVGVRAAYLNSTLSGAEAAATERALREGEIDLLYVAPER
LMTGRFLELLERAKIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPSVPRIALTATAD
AITRDEIIHRLALDDARVFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEVRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTSKLDALLGLCETISCRRVRLLNYFGEASQPCGNCDTCLEPPASWDATREAQMA
LSCVFRAQRASGFNFGSSHLIEILRGGRTEKVLQRGHDQLSTFGIGAALSEPEWRAIFRQ
LVAYGYLAVDHGGFGALMLTEAAKPVLKNEEKVTLRRYVKPQRTRQSSSRSGTRVDPTAG
MGARERARWDALRAWRAETAKTDGVPAYVIFHDATLAEIARNAPETIDDLRHIPGMGVRK
LERFGDEIIDVVESA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgccctcgaaatactcgacgaagtctttggttattccgcctttcgcggccag
cagggcgagatcgtcgagcacgtcgccggcggcggcgattgtctcgtgctgatgccgacc
ggcggcggcaagtcgctgtgctaccagattcccgcgctgctgcgccgagaggccgggcag
ggcgccggcatcgtcgtgtcgccgctgatcgcgctgatgcaggaccaggtcgccgcgttg
agcgaagtcggcgtgcgtgcggcctacctgaattcgacgctgtcgggcgccgaggccgcg
gccaccgagcgcgcgctgcgcgagggcgaaatcgacctgctgtacgtcgcgccggagcgc
ttgatgacggggcgcttcctcgaactgctcgagcgcgcgaagatcggcctgttcgcgatc
gacgaagcgcactgcgtgtcgcaatgggggcacgatttccgcccggaatacatccagctg
tcggtattgcacgagcgcttcccgtcggtgccgcgcatcgcgctgaccgccacggccgac
gcgatcacgcgcgacgagatcatccatcgtctcgcgctcgacgacgcgcgcgtgttcgtg
tcgagcttcgaccgcccgaacatccgttaccggatcgtcgaaaaggacaacgcgcgctcg
cagttgctcgacttcatccgtgccgagcacacgaatgccgacggcacgacggacgcgggc
gtcgtctattgcctgtcgcgtcgcaaggtcgaggaaacggccgaatggctgaaggcgcag
ggcgtgcgcgcgctgccgtatcacgcggggatggagttcgaggtgcggcagaagcaccag
gaaatgttccagcgcgaggaaggcatcgtgatgtgcgcgacgatcgcgttcggcatgggc
atcgacaagcccgacgtccgcttcgtcgcgcacctcgatttaccgaaaagcgtcgaaggc
tattaccaggaaaccggccgcgcgggtcgtgacgggatgcccgccaacgcgtggatggcg
tatggcctcggcgacgtcgtccagcagcgcaagatgatcgacgaatccgatgcggacgac
gcgcacaagcgcgtgcagacgtcgaagctcgacgcgctgctcgggttgtgcgagacgatc
tcgtgccgtcgcgtgcggttgctgaactacttcggcgaggcgagccagccgtgcggcaac
tgcgacacgtgcctcgagccgcccgcttcgtgggacgcgacgcgcgaggcccagatggcg
ctgtcgtgcgtgttccgcgcacagcgcgcgagcggcttcaatttcggctcgagccacctg
atcgagatcctgcgcggcgggcgcaccgagaaggtgttgcagcgcggccacgaccagctc
agcacgttcggcatcggcgcggcgctgtccgagcccgagtggcgcgcgattttccggcaa
ctggtcgcgtacggctacctggcggtcgaccatggcggcttcggcgcgctgatgcttacc
gaggccgcgaagcccgtgctgaagaacgaggaaaaagtcacgctgcgccgctacgtgaag
ccgcagcgcacccgccagtcgtcgagccgcagcggcacgcgcgtcgacccgacggccggc
atgggcgcccgcgagcgcgcacggtgggacgcgctgcgcgcatggcgcgcggaaaccgcg
aaaacggacggcgtgccggcctacgtgatcttccacgacgcgacgctcgccgaaatcgcg
cgcaacgcgccggagacgatcgacgacctgcgccacatccccggcatgggcgtgcgcaag
ctggaacgcttcggcgacgagatcatcgacgtcgtcgaatcggcctga
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