Burkholderia orbicola: Bcenmc03_0384
Help
Entry
Bcenmc03_0384 CDS
T00669
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bcm
Burkholderia orbicola
Brite
KEGG Orthology (KO) [BR:
bcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcm03016
]
Bcenmc03_0384
Enzymes [BR:
bcm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Bcenmc03_0384
Transfer RNA biogenesis [BR:
bcm03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Bcenmc03_0384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ACA89564
UniProt:
B1JU79
LinkDB
All DBs
Position
1:424471..425055
Genome browser
AA seq
194 aa
AA seq
DB search
MNGDRLRAFVALMPDAASRDALHALPVTRGARRTPSAQLHMTLAFIGAIERERCDALAAY
LPALAAAHALPSLPVERIAWWPSLPRARLIVAELAADAACVALNAGLAALLRELGVPADR
RPFRPHVTLARLPHDAIGQPAHGGAPGRPVEVRVEALTLFESRLSQEGVSHRPIVSAPIA
RADDSVGAEKRPHE
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgaccggctccgtgcgttcgtcgcgctgatgcccgatgcggcatcgcgcgat
gcgctgcacgcgttgccggtcacccgcggggcgcggcgcacgccgtccgcgcaactgcac
atgacgctcgcgttcatcggcgcaatcgagcgggagcggtgcgacgcgctggccgcgtac
ctgcccgcgctcgcggccgcgcatgcgttgccgtcgttgccggtcgagcggatcgcgtgg
tggccgagcctgccgcgtgcgcggctgatcgtcgcggagctcgcggccgatgccgcctgc
gtcgcgctgaatgcggggctggcggcgctgttgcgcgaactcggcgtgccggccgaccgg
cggccgttccggccgcacgtgacgctcgcgcggctgccgcacgatgcgatcggccagccc
gcgcacggcggcgcgccggggcggcccgtcgaggtgcgcgtcgaagcgctgacgctgttc
gaaagccggctgtcgcaggagggcgtgtcgcatcggccgatcgtgtcggcgccgattgca
cgcgcggacgacagcgtcggcgctgagaagcggccccacgaatga
DBGET
integrated database retrieval system
