Burkholderia orbicola: Bcenmc03_0580
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Entry
Bcenmc03_0580 CDS
T00669
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bcm
Burkholderia orbicola
Brite
KEGG Orthology (KO) [BR:
bcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcm03016
]
Bcenmc03_0580
Enzymes [BR:
bcm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Bcenmc03_0580
Transfer RNA biogenesis [BR:
bcm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Bcenmc03_0580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ACA89758
UniProt:
B1JVC8
LinkDB
All DBs
Position
1:635780..637870
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AA seq
696 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPAAGELMQEADTA
AQQIDLDFLWECAPADEFAYTALAAEYFGATYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAQYEEELKAGKLPEAFAGKVLGLLTRPDKNSIEYKA
MEAAAGARGVSPARLMLDCGGIESPRALHEARFLAEFFPHGTGFPPVTVGPLPDDLPRAN
VEAFSIDDVTTTEIDDAFSVEHLSDGRVRIGVHIAAPALGIVRGDPVDAIARTRLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVNRETQDIVANETRAELVFVKNNLRHNT
LDELVTEETLAAGTGDYPHKDDIAVLWPLAQALFEKRQVARAGYGLKREVQRNTDYNFYV
EGEHVTITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRGFGAPGPKRTRM
QTTAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYTAYADYQRRMEYFWCLRWLKQEQKKQVVASVVKGDLVRLEEIPLLLHVPGLG
VHARGTRVLLDVMSLDELTIEASVRLLNVLDAPTVTSGDTAEADEEDDAEGGDDTLVDAE
DASAQAEAEALAESGDATAGGGEAASGNDGETGRAS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcatttcaggtcgagttgcccggcgggcggcgggcgaaggtgcgcgcgaaagac
gtgctgatcgaattcgacaagccggccgcgggcgaactgatgcaggaggccgacacggcc
gcgcagcagatcgatctggacttcctgtgggaatgcgcgccggccgacgagttcgcctat
acggcgctggccgccgagtacttcggcgcgacgtacggtccggtcgagcgcgcggcgctg
gtgctgcggctgcacggctcgcccgtctacttccgtcgcaaggggcgcggccagtaccag
cgcgcaccggaagagcagctcaagatggcgctcgcgtcgctcgagcgcaagcgccagcag
gcgctggtgcaggcgcagtatgaagaggaactgaaggccggcaagctgccggaagcgttc
gcgggcaaggtgctcgggctgctgacgcggccggacaagaattcgatcgaatacaaggcg
atggaagcggcggccggcgcgcgcggcgtgtcgccggcgcggctgatgctcgactgcggc
ggcatcgagtcgccgcgcgcgctgcacgaagcgcgcttcctcgcggaattctttccgcac
ggcacgggctttccgcccgtcacggtcggcccgctgccggacgacctgccccgcgcgaac
gtcgaggcgttctcgatcgacgacgtcacgaccaccgaaatcgacgacgcgttctcggtc
gagcacctgtccgacggccgggtgcggatcggcgtgcacatcgcggcgccggcgctcggc
atcgtgcgcggcgatccggtcgacgcgatcgcgcgcacgcgcctgtcgacggtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgtgttcacgctgaaagag
ggcgattaccgcccggcgctgtcgctgtacatcatcgtcaaccgtgagacgcaggacatc
gtcgcgaacgagacgcgtgccgagctcgtgttcgtgaagaacaacctgcgccacaacacg
ctcgacgagctggtcaccgaagagacgctcgcggccggcaccggcgactatccgcacaag
gacgacatcgccgtgctgtggccgctcgcgcaggcactgttcgagaagcgccaggtcgcg
cgcgccggctacgggctgaagcgcgaggtgcagcgcaacaccgactacaacttctacgtc
gaaggcgagcacgtgacgatcacgccgcgccgccgcggctcgccgctcgacctgatcgtg
tcggagctcgcgattctcgcgaactcgacctggggcgcgttcctgcacgaccacacggtg
ccgggcatctaccgctcgcagcgcggcttcggcgcgccgggcccgaagcgcacgcggatg
cagacgacggccgcgccgcacgaaggcctcggcgtcgcgcagtacgcgtggagcacgtcg
ccgctgcgccgctacgtggacctcgtgaaccagtggcaactgctcgcgtgcgtgcagcac
ggcgtcaccgcgaagctcgccgcgccgttcaagccgaaggacgccgatctctacgcggtc
gtgcagggcttcgacgatacgtacacggcctacgccgactaccagcgccggatggaatat
ttctggtgcctgcgctggctcaagcaggagcagaagaaacaggtcgtcgcgagcgtcgtg
aagggcgatctcgtgcgcctggaggaaatcccgctgctgctgcacgtgccgggtctcggc
gtgcatgcgcgcggcacgcgcgtgctgctcgacgtgatgtcgctcgacgagctgacgatc
gaggcgtcggtgcgcctgttgaacgtgctcgacgcgccgaccgtgacgagcggcgatacg
gccgaggccgacgaagaggatgacgccgaaggcggcgacgacacgctggtcgacgcggaa
gacgcgtcggcgcaagccgaggccgaagcgctggccgaatcgggcgacgcgacggcgggg
ggcggcgaagccgcgagcggcaacgacggcgaaacggggcgcgcatcatga
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