Burkholderia orbicola: Bcenmc03_0966
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Entry
Bcenmc03_0966 CDS
T00669
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bcm
Burkholderia orbicola
Pathway
bcm03030
DNA replication
bcm03430
Mismatch repair
bcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bcenmc03_0966
03430 Mismatch repair
Bcenmc03_0966
03440 Homologous recombination
Bcenmc03_0966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcm03032
]
Bcenmc03_0966
03400 DNA repair and recombination proteins [BR:
bcm03400
]
Bcenmc03_0966
Enzymes [BR:
bcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bcenmc03_0966
DNA replication proteins [BR:
bcm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bcenmc03_0966
DNA repair and recombination proteins [BR:
bcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bcenmc03_0966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ACA90143
UniProt:
B1JXN1
LinkDB
All DBs
Position
1:1065827..1066954
Genome browser
AA seq
375 aa
AA seq
DB search
MSDSRPSDPASEQPLVFVDLETTGGSLADHRITEIGVVEIGPLGVSTWTSLVNPGQAIPP
FIQQLTGISDAMVRDAPTFASLAPALFERLDGKLFVAHNASFDRGFLRAEFERAGLAFNP
DVLCTVRLSRALFPRESRHGLDALIERHGLVPAARHRALADADLLWQFWRQLHDIVPLER
LREQIARTTRHFRLGGDLTEAWLDTAPAGCGAYALFGERDEALYVGRSVRVRQRLRALLT
GERRSSKEMRLAQQVRRVEWRETGNELGAMLAEAQWIARLRPSYNRRPAADAVRAGGAPW
PFEGAVAFEASGERRLFHVIDGWCYLGSAESLDAAARLVADATDGTFEPFTHRLLQTHLA
RGLQVIPLVALTPAD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcccgtccgtccgatcccgccagcgaacagccgctcgtcttcgtcgacctt
gaaaccaccggcggctcgctcgccgatcaccgcatcaccgaaatcggcgtggtcgaaatc
ggaccgctcggcgtatcgacgtggacgagcctcgtcaatccggggcaggcgattccgccg
ttcatccagcaactgactggcatttcggacgcgatggtgcgtgacgcgccgacgttcgcg
tcgctcgcgccggcactgttcgagcggcttgacggcaagctgttcgtcgcgcacaacgcg
agcttcgaccgcggcttcctgcgcgccgaattcgagcgcgccgggctggccttcaatccc
gatgtgctctgtacggtgcggctgtcgcgcgcgctgtttccgcgcgaatcgcggcatggg
ctggatgcgttgatcgaacggcatgggctcgttccggccgcgcgccatcgcgcgctggcc
gatgccgacctgctctggcagttctggcgccagttgcacgacatcgtgccgctcgagcgg
ctgcgcgagcagatcgcgcggacgacgcgccatttccgtctgggcggcgatctcaccgag
gcctggctggataccgcgccggcagggtgcggtgcgtatgcgctgttcggggagcgtgac
gaagcgctgtatgtcggccgcagtgtgcgcgtgcggcagcggctgcgtgcgctgctgacc
ggcgagcgccgctcgtcgaaggaaatgcggctcgcgcagcaggtgcggcgcgtcgaatgg
cgcgagaccggcaacgagctgggggcgatgctcgccgaagcgcaatggatcgcgcggttg
cgcccgtcgtacaaccggcgccccgcagccgacgccgttcgcgcgggcggggcgccctgg
ccgttcgaaggcgccgtcgcgttcgaggcgagcggcgagcgccgcctgtttcacgtgatc
gacggctggtgctatctcggttcggcggagtcgctcgatgcggccgcgcggctcgtggcc
gacgcgacggacggcacgttcgaaccgttcacccatcgcctgctacagacgcatctcgcg
cgcggcctgcaggtgattccgctcgtggcgctcacgccggcggattga
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