Burkholderia orbicola: Bcenmc03_1007
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Entry
Bcenmc03_1007 CDS
T00669
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
bcm
Burkholderia orbicola
Brite
KEGG Orthology (KO) [BR:
bcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcm03032
]
Bcenmc03_1007
03036 Chromosome and associated proteins [BR:
bcm03036
]
Bcenmc03_1007
03400 DNA repair and recombination proteins [BR:
bcm03400
]
Bcenmc03_1007
DNA replication proteins [BR:
bcm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Bcenmc03_1007
Chromosome and associated proteins [BR:
bcm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Bcenmc03_1007
DNA repair and recombination proteins [BR:
bcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Bcenmc03_1007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ACA90184
UniProt:
B1JXS2
LinkDB
All DBs
Position
1:1115818..1116141
Genome browser
AA seq
107 aa
AA seq
DB search
MTKSELVAQLASRFPQLVLKDADFAVKTMLDAMSDALAKGHRIEIRGFGSFGLNRRPARV
GRNPKSGEKVQVPEKFVPHFKPGKELRERVDGRAGEPLKADDPDDDR
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgagttggtcgcgcagctggcatcgcgatttccgcaacttgtcctcaag
gatgcggatttcgcggtgaaaacgatgctcgatgcgatgtccgacgccctggcgaaaggg
catcgcattgaaattcggggtttcggcagctttggcctcaatcgtcgcccggcgcgcgtc
ggacgcaacccgaagtcgggggagaaagtgcaggtgcccgagaagttcgtgccgcacttc
aaacctggcaaggaattgcgtgaacgcgtcgacggccgcgccggtgaaccgctgaaggct
gacgatccggacgacgaccgttga
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