Burkholderia orbicola: Bcenmc03_2277
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Entry
Bcenmc03_2277 CDS
T00669
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bcm
Burkholderia orbicola
Pathway
bcm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bcenmc03_2277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcm03019
]
Bcenmc03_2277
03016 Transfer RNA biogenesis [BR:
bcm03016
]
Bcenmc03_2277
Enzymes [BR:
bcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Bcenmc03_2277
Messenger RNA biogenesis [BR:
bcm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bcenmc03_2277
Transfer RNA biogenesis [BR:
bcm03016
]
Prokaryotic type
tRNA degradation factors
Bcenmc03_2277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ACA91438
UniProt:
B1JVP5
LinkDB
All DBs
Position
1:complement(2547600..2549747)
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AA seq
715 aa
AA seq
DB search
MSMFNKVVKEFQWGQHKVRLETGEVARQASGAVIVDVEDTVVLATVVGAKSAKPGQDFFP
LTVDYLEKTYSAGKIPGGFFRREGRPSEHETLTSRLIDRPLRPLFPEGFYNEVQVVIHVL
SVNPEIPADIPALIGASAALAVSGLPFNGPVGAARVAYIDNAYVLNPTRDQLKASSLDLV
VAGTERAVLMVESEADQLSEEVMLGAVVFGHEQMQIAIDAIHELVRDGGKPEWDWQPAAK
NEALIARVTELAQNDLLAAYQLRDKQARSAKLKEVYAATSAKLEEDALAAGTVAADKATV
GNVLFDIEAKIVRSQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQIIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVK
CLPSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTEQGVTALQMDIKIQGITKEIMQVALAQAKEGRLHI
LGKMTSAVSGANTQLSEFAPRMITVKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTSSEGMAEAKKRIEQITAEIEVGQVYEGTVLKLLDFGAIVNLLPGKDGLLHISE
IVNERVKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNEAAAAAQSDTPPQQ
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttcaacaaggtcgtgaaggaattccagtggggccagcacaaggtgcgcctc
gaaaccggtgaagtcgcccgccaggcgagcggcgccgtgatcgtcgacgtcgaagacacc
gtcgtgctggcaaccgtcgtcggcgcgaagtcggcgaagccgggtcaggatttcttcccg
ttgaccgtcgactacctcgagaagacctactcggccggcaagatcccgggcggcttcttc
cgccgcgaaggccgtccgtcggagcacgagacgctgacgtcgcgcctgatcgaccgtccg
ctgcgcccgctgttcccggaaggcttctacaacgaagtccaggtcgtgatccacgtgctg
tccgtgaacccggaaatcccggccgacatccccgcgctgatcggcgcatcggccgcgctc
gccgtgtcgggcctgccgttcaacggcccggtcggtgccgcacgcgtggcatacatcgac
aacgcatacgtgctgaacccgacgcgtgaccagctcaaggcatcgagcctcgacctcgtc
gtcgcgggtacggagcgcgccgtgctgatggtcgagtcggaagccgaccaactgtcggaa
gaagtgatgctgggcgccgtggtgttcggccacgagcagatgcagatcgcgatcgacgcg
atccacgaactggtgcgcgacggcggcaagcccgagtgggactggcagccggcggcgaag
aacgaggcgctgatcgcacgcgtgaccgagctggcgcagaacgatctgctcgccgcttac
cagctccgcgacaagcaggcgcgttcggcaaagctgaaggaagtctatgcggcaacctcg
gcgaagctcgaggaagacgcgctggcggccggtacggtcgcggccgacaaggccacggtc
ggcaacgtgctgttcgacatcgaagcgaagatcgtccgttcgcagatcctgaacggcgag
ccgcgcatcgacggccgcgacacgcgcaccgtgcgtccgatcgaaatccgcaccggcgtg
ctgccgcgtacccacggctcggcactgttcacgcgcggcgagacgcaggcgctggtcgtc
gcgacgctcggcacgaagggtgacgagcagatcatcgacgcgctcgaaggcgaataccgc
gagcgcttcatgctccactacaacatgcccccgttcgcgaccggcgaaacgggccgcgtc
ggctcgccgaagcgccgcgaaatcggccacggccggctggccaagcgcgcgctggtcaag
tgcctgccgagcgccgacgaattcggctactcgatccgcgtcgtgtcggaaatcaccgag
tcgaacggttcgtcgtcgatggcttcggtatgcggcggctgcctcgcgctgatggacgcc
ggcgtgccgatgaaggcgcacgtcgcgggtatcgcgatgggcctgatcctcgaaggcaac
aagttcgcggtgctgaccgacatcctcggcgacgaagatcacctcggcgacatggacttc
aaggtggccggcacggagcagggcgtgacggcgctgcagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgcgctcgcgcaggcgaaggaaggccgcctgcacatc
ctcggcaagatgacgtcggcggtgtcgggtgcgaacacgcaactgtcggaattcgcgccg
cgcatgatcacggtcaagatcaacccggaaaagatccgcgacgtgatcggcaagggcggt
tcggtgatccgcgcgctgacggaagaaacgggcacgaccatcgacatctcggatgacggc
gtcgtgacgatcgccagcacgagcagcgaaggcatggccgaagcgaagaagcgcatcgag
caaatcacggccgagatcgaagtcggtcaggtgtacgaaggcacggtgctcaagctgctc
gatttcggcgcgatcgtgaatctgctgccgggcaaggatggcctgctgcacatctcggaa
atcgtcaacgagcgcgtgaaggacatcaacgactacctgaaggaaggtcagcaggtgaag
gtcaaggtgatccagacggacgagaagggtcgcgtgcgtctgtcggccaaggcgctgctg
aatgaagcagcggcggcagcgcagtcggatacgccgccgcagcagtaa
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