Burkholderia orbicola: Bcenmc03_2336
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Entry
Bcenmc03_2336 CDS
T00669
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bcm
Burkholderia orbicola
Pathway
bcm03030
DNA replication
bcm03430
Mismatch repair
bcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bcenmc03_2336
03430 Mismatch repair
Bcenmc03_2336
03440 Homologous recombination
Bcenmc03_2336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcm03032
]
Bcenmc03_2336
03400 DNA repair and recombination proteins [BR:
bcm03400
]
Bcenmc03_2336
Enzymes [BR:
bcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bcenmc03_2336
DNA replication proteins [BR:
bcm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bcenmc03_2336
DNA repair and recombination proteins [BR:
bcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bcenmc03_2336
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
ACA91497
UniProt:
B1JW60
LinkDB
All DBs
Position
1:complement(2609681..2613208)
Genome browser
AA seq
1175 aa
AA seq
DB search
MSDPRFVHLRVHSEFSIADGIVRIDDIVKAAAADGQGALALTDLGNAFGLVRFYQEARGK
GIKPIAGCDVWIANPDDRDKPSRLLLLVKDKVGYLNLCELLSKAWLTNQYRGRAELDASW
LDGELAQGLLALSGAQQGDIGLALAAGNEEAARRHAERWARVFPGGFYIELQRYGQPGAE
AYIQQAAALAASLKLPVVATHPTQFMTDDDFTAHEARVCISEGDILANPRRQKRFTTDQY
FRTQDEMAALFADLPSAIANTVEIAKRCNLKLELGKPKLPLFPTPDGMSLDDYLVQLSKE
GLEARLAQLYPVEAERDAQRDTYYKRLEFECGTITKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYALGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTIADAMK
EEPQLQERYDHEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDDGG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDSSKADWSLAQVPLDDPASFQ
ILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VDYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHRE
IFAEGAAKNGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCVVNNLAVLPPDINQSHYRFEPVAEADGKRSRTIRYGLGAVK
GSGQNAIEEILRAREEKAFTDLFDFCERIDRRVVNRRTVEALIRAGAFDSLNPNRAQLIA
SVPLAMEAADQAEANAMQAGLFDMGAESPHALVDEPAWDDKRRLQEEKAALGFYLSGHLF
DAYRDEVRRFVRQKVGDLKEGRDKLVAGIIASLRTQMTQRGKMLIALLDDGTGQCEITIF
NEQFEANKALFKEDELLIVQGQARNDAFTGGIRFTADTVMDLERARSRYAQAVRLTMNGN
ADALALRRVLEPHVSKDDPAAANVVDAPAPRGGGRDGGRRPPPPLPNGLAVQIHYSNARA
QGEMRLGDAWRVKPSDVLLAELRAAFDGSVVEITY
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcctcgcttcgtccatcttcgcgtccactccgaattctcgattgccgacggc
atcgtgcgcattgacgacatcgtcaaggcggccgccgcggacggtcagggcgcgctcgcg
ctcaccgatctcggcaacgcgttcggcctcgttcgtttctaccaggaagcccgcggcaag
ggcatcaagccgatcgccggctgcgacgtctggattgccaatccggacgaccgcgacaag
ccgtcgcggttgctgctgctggtcaaggacaaggtcggttacctgaatctctgcgagctg
ctgtcgaaggcgtggctcacgaaccagtaccgcggccgcgcggaactcgacgcgagctgg
ctcgacggcgagctcgcgcaggggctgctcgcgctgtcgggcgcgcaacagggcgatatc
ggtcttgcgctggccgcgggcaacgaagaagccgcacgccgtcacgccgagcgctgggcg
cgggtgtttccgggcggcttctacatcgagctgcagcgttacggccagccgggtgccgag
gcgtacatccagcaggcggcggcgctcgccgcgtcgctgaagctgccggtcgtcgcgacg
cacccgacgcagttcatgaccgacgacgatttcaccgcgcacgaggcgcgcgtgtgcatc
tcggaaggcgacatcctcgcgaacccgcggcgccagaagcgtttcacgaccgaccagtat
ttccgcacgcaggacgagatggccgcgctgttcgccgacctgccgtcggcgatcgcgaac
acggtcgagatcgcgaagcgctgcaacctgaagctcgagctcggcaagccgaaactgccg
ctgttcccgacgccggacggcatgtcgctcgacgactacctggtccagttgtcgaaggaa
gggctcgaggcccgtctcgcgcagttgtatccggtcgaggccgagcgcgacgcgcagcgc
gacacgtactacaagcgcctcgaattcgagtgcgggaccatcacgaagatgggcttcccc
ggctacttcctgatcgtcgcggacttcatcaactgggcgaagaacaacggcgtgccggtc
ggcccgggccgcggctcgggcgccggctcgctggtcgcgtacgcgctcggcattaccgac
ctcgatccgctgcgctacaacctgctgttcgagcgcttcctgaacccggagcgcgtgtcg
atgcccgacttcgacatcgacttctgccagcacggccgcgatcgcgtgatccagtacgtg
aaggagaagtacggcgcggacgccgtctcgcagatcgccacgttcggcacgatggccgcg
aaggcggccgtgcgcgacatcggtcgcgtgctcgacctcggctacatgttcaccgacggc
atcgcgaagctgattccgttcaagcccggcaagcatgtgacgattgccgacgcgatgaag
gaagagccgcagctgcaggagcgctacgaccacgaggacgaagttcaccagctgctcgac
ctcgcgcagcgcgtcgagggtctcacgcgtaacgtcgggatgcacgctggcggcgtgctg
atcgcgcccggcaagctgaccgatttctgcccgctgtacacgcagggcgacgacggcggc
gtggtcagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaagttcgacttt
ctgggcctcacgacgctgacgatcctcgactgggccgagcgctacatccgccgcctcgat
tcgtcgaaggccgactggtcgctcgcccaggtgccgctcgacgatccagcctcgttccag
atcctgaagaaggcgaacacggtcgcggtgttccagctggaaagccgcgggatgcagggc
atgctgaaggatgcgcagcccgaccgcttcgaggacatcatcgcgctcgtgtcgttgtac
cgtccgggcccgatggacctgattccgagcttctgcgcgcgcaagcacgggcgcgagaag
gtcgactatccggacccgcgcgtcgaacccgtcctgaaagagacctacggcatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctcggcggcgcc
gatttgctgcgtcgtgcgatgggcaagaagaagcccgaggagatggccaagcaccgcgag
atcttcgccgagggtgcggcgaagaacggcctcacgcgcgagaagtccgacgagatcttc
gacttgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggccgcgtatgcg
ctgctcgcgtattacaccgcgtggctgaaggcgcaccatccggccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgactgcgtc
gtgaacaacctcgccgtgctgccgccggacatcaaccagtcgcattaccggttcgagccg
gtcgcggaagccgacggcaagcgctcgcgcacgatccgctacggccttggcgcggtgaag
ggcagcggccagaacgcgatcgaggaaatcctgcgtgcgcgcgaggaaaaggcgttcacc
gacctgttcgacttctgcgaacggatcgaccggcgcgtcgtcaaccgccgcacggtcgag
gcgctgatccgcgccggcgcgttcgattcgctgaacccgaaccgtgcgcagctgatcgcg
tcggtgccgctcgcgatggaagcggccgaccaggccgaagcgaacgcgatgcaggccggc
ctgttcgacatgggcgccgagtcgccgcatgcgctcgtcgacgagcccgcgtgggacgac
aagcgccgcctgcaggaagaaaaggccgcgctcggcttctacctgtccggccacctgttc
gatgcgtatcgcgacgaagtgcggcgcttcgtgcggcagaaggtcggtgatctgaaggaa
gggcgcgacaagctcgtcgccggcatcatcgcgtcgctgcgcacgcagatgacccagcgc
gggaagatgctgatcgcgctgctcgacgacggcacgggccagtgcgagatcacgatcttc
aacgaacagttcgaggcaaacaaggcgctgttcaaggaagacgagctgctgatcgtgcaa
gggcaggcgcgcaacgacgcattcaccggcggcattcgcttcacggccgataccgtgatg
gatctcgagcgcgcgcgcagccgctacgcgcaggccgtgcggttgacgatgaacggcaac
gccgacgcgctcgcgctgcgccgcgtgctcgagccgcacgtgtcgaaggacgatccggcc
gccgcgaacgtggtcgacgcgcccgcgccgcgcggcggcggccgcgatggcggtcggcgc
ccgccgccgccgctgccgaacgggcttgcggtccagatccactacagcaacgcgcgcgcg
caaggcgaaatgcgtctgggcgacgcgtggcgcgtgaagccgagcgacgtgctgctggcg
gagctgcgtgcggcgttcgacggcagcgtcgtcgaaatcacgtactga
DBGET
integrated database retrieval system
