Burkholderia orbicola: Bcenmc03_3641
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Entry
Bcenmc03_3641 CDS
T00669
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bcm
Burkholderia orbicola
Pathway
bcm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bcm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Bcenmc03_3641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcm03021
]
Bcenmc03_3641
Transcription machinery [BR:
bcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bcenmc03_3641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KIND
Motif
Other DBs
NCBI-ProteinID:
ACA92793
UniProt:
B1K3S2
LinkDB
All DBs
Position
2:complement(540580..542631)
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AA seq
683 aa
AA seq
DB search
MTKKLNEVSVEDDANQSDEQPAAAAAPGKSKVRDRRAKEKALLKEAFATSTPGTAEELEE
RRVKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDAET
LLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIA
KRIEDGLRHMVMAISACPTTIADILAMAERVANEEIRVDELVDGLLDPNASDSADTDGFS
AKEAEAIENEDEEAEEEEEEEEEEEDDGAAQASANAAQLEALKRASLEKFSQISEWFDKM
RRAFEKEGYKSKAYLKAQETIQSELMTIRFTARTVERLCDTLRAQVDEVRQVERQILHIV
VDKCGMPRSEFIARFPGSETDLDWAEKITAEGHPYSAVLSRNVPAIREQQQRLLDLQARV
VLPLKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIG
LMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQIL
QETGLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTVAP
ADAALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIE
AKALRKLRHPSRSDKLKSFLEGN
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaagctgaacgaagtatccgtcgaagacgacgcaaatcagagcgacgagcag
cccgcagccgcggctgcaccgggcaagtccaaggtgcgcgatcgtcgcgccaaggaaaag
gcgctgctgaaggaagcgttcgcgacgagcacgccgggcacggccgaggagctcgaagag
cgccgcgtgaaactgcgcgcgctgatcaagctcggcaaggagcgcggcttcctcacgtac
gccgaaatcaacgaccacctgccggacaacttcaccgagacggaagccctcgagggcatc
atcggcacgttcaacgacatgggcgtggcggtttacgagcaggcgccggacgcggaaacg
ctgctcctgaacgacaacgcgcccgccgcgtcgtcggacgatgaagtcgaggaggaagcg
gaagtcgcgctgtccaccgtcgattcggaattcggccgcacgaccgatccggtccggatg
tacatgcgcgagatgggcacggtcgagctgctcacgcgcgaaggcgaaatcgagatcgcg
aagcggatcgaggacggcctgcgccacatggtgatggccatctccgcgtgcccgacgacg
atcgccgacatcctcgcgatggccgaacgcgtcgcgaacgaagagatccgcgtcgacgag
ctcgtcgacggcctgctcgatccgaatgcttcggactccgccgatacggacggcttctcc
gcgaaggaagcggaagccatcgagaacgaggacgaggaagccgaagaggaagaggaagaa
gaggaagaggaggaagacgacggtgccgcgcaggcatcggcgaacgccgcccagctcgaa
gccctcaagcgcgcatcgctcgagaagttctcgcagatcagcgagtggttcgacaagatg
cgccgcgcgttcgagaaggaaggctacaagtcgaaggcctacctgaaggcgcaggaaacg
atccagagcgaactgatgacgatccgcttcaccgcgcgtaccgtcgaacgcctgtgcgac
acgctgcgcgcgcaggtggacgaagtgcgtcaggtcgagcgtcagatcctgcacatcgtc
gtcgacaagtgcggcatgccgcgctcggaattcatcgcgcgcttcccgggcagcgagacg
gatctcgactgggccgagaagatcaccgcggaaggccatccgtacagcgcggtgctgtcg
cgtaacgtcccggcgatccgcgaacagcagcagcgcctgctcgacctgcaggcgcgcgtc
gtgctgccgctgaaggacctgaaggaaaccaaccgccagatggcggccggcgaactgaag
gcgcgtcaggcgaagcgcgaaatgaccgaggccaacctgcgtctcgtgatctcgatcgcg
aagaagtacacgaaccgcggcctgcagttcctcgacctgatccaggaaggcaacatcggc
ctgatgaaggcggtggacaagttcgaataccgtcgcggctacaagttctcgacctatgcg
acgtggtggatccgtcaggccatcacgcgttcgatcgccgaccaggcgcgcacgatccgt
attccggttcacatgatcgaaacgatcaacaagatgaaccgcatctcgcggcagatcctg
caggaaaccggtctcgagccggacccggcaacgctcgccgagaagatggagatgccggaa
gacaagatccgcaagatcatgaagatcgcgaaggagccgatctcgatggaaacgccgatc
ggtgacgacgacgattcccatctcggcgacttcatcgaggacaccaacacggtcgcgccg
gcggatgccgcgctgcatgccagcatgcgcgacgtcgtgaaggacgtgctcgattcgctg
acgccgcgcgaggcgaaggtgctgcggatgcgtttcggtatcgagatgagcaccgatcac
acgctcgaggaagtcggcaagcagttcgacgtcacgcgcgagcggatccgtcagatcgag
gccaaggcgctgcgcaagctgcgtcacccgagccgttccgacaagctgaagtcgttcctc
gaagggaactga
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