Burkholderia orbicola: Bcenmc03_4313
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Entry
Bcenmc03_4313 CDS
T00669
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
bcm
Burkholderia orbicola
Brite
KEGG Orthology (KO) [BR:
bcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcm03009
]
Bcenmc03_4313
Enzymes [BR:
bcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Bcenmc03_4313
Ribosome biogenesis [BR:
bcm03009
]
Prokaryotic type
rRNA helicases
Bcenmc03_4313
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
YjeF_N
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ACA93458
UniProt:
B1K8C4
LinkDB
All DBs
Position
2:1277294..1278691
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AA seq
465 aa
AA seq
DB search
MTQPTATPFSALPLTPATLANLAQLGYVDMTPIQAASLPVALAGQDLIAQAKTGSGKTAA
FSLALLARLDARSFDVQAMILCPTRELADQVAQEVRRLARAEENVKVLTLCGGTPMRPQA
QSLEHGAHIVVGTPGRIMDHLDRGNLKLDALNTLVLDEADRMLDMGFFDDIAKVARMCPT
TRQTLLFSATYPDGIAKLSQQFLRNPKEIKLAERHDDSKIRQRFYEVTEDERLHAVGQLL
NHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELDQRERDQVLIQFANRSCSVLV
ATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQDGWALSLVSMDEMGRVGAI
EQAQKREVEWHPLAELKPADDSVLLPPMETLQILGGRKDKIRPGDVLGALTGDAGFDGKQ
IGKINVTEFSTYVAIERGVARDALRKLNAGKIKGKRVKVRLMDEE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ttgacccaaccgaccgccacgccgttcagcgcgctgccgctgacgcccgccacgctcgcg
aacctcgcgcagctcggctatgtcgacatgacgccgatccaggccgcgagcctgccggtc
gcgctggccggccaggacctgatcgcgcaggcgaagacgggcagcggcaagaccgccgcg
ttctcgctcgcgctgctcgcgcgcctcgatgcgcgcagcttcgacgtgcaggcgatgatc
ctgtgcccgacgcgcgagctcgccgaccaggtcgcgcaggaagtgcgccgcctcgcgcgc
gccgaggaaaacgtgaaggtgctgacgctgtgcggcggcacgccgatgcgtccgcaggcg
cagagcctcgagcacggcgcgcatatcgtcgtcggcacgccgggccgcatcatggatcac
ctcgatcgcggcaacctgaagctcgacgcgctgaacacgctggtgctcgacgaagccgac
cggatgctcgacatgggcttcttcgacgacatcgcgaaggtcgcccggatgtgcccgacg
acgcgtcagacgctgctgttctccgcgacctacccggacggcatcgcgaagctgagccag
cagttcctgcgcaatccgaaggaaatcaagctcgcggaacgccacgacgacagcaagatc
cgccagcgcttctatgaagtgaccgaggacgagcggctgcatgcggtcggccagttgctg
aaccactaccggccggtgagcacgatcgcgttctgcaacaccaagcagcaatgccgcgac
ctgctcgacgtgctgcacgcgcagggcttccacgcgctcgcgctgcacggcgagctcgat
cagcgcgagcgcgaccaggtgctgatccagttcgcgaaccgcagctgctcggtgctggtg
gcgaccgacgtcgccgcgcgcgggctcgacatcgcgcagctcgaagcggtgatcaacgtc
gacgtgacgcccgaccccgaagtgcacgtacaccgcatcggccgcaccggccgcgcggat
caggacggctgggcgctgagcctcgtgagcatggacgagatgggccgcgtcggcgcgatc
gaacaggcgcagaagcgcgaggtcgaatggcatccgctcgctgaactgaagccggcggac
gacagcgtgctgctgccgccgatggaaacgctacagatcctcggcgggcgcaaggacaag
atccgcccgggcgacgtgctcggcgcgctgaccggcgacgccggattcgacggcaagcag
atcggcaagatcaacgtgaccgagttctcgacctatgtcgcgatcgagcgcggcgtcgcg
cgcgacgcgctgcgcaagctcaatgccgggaagatcaagggcaagcgggtcaaggtccgg
ttgatggacgaagagtaa
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