Burkholderia orbicola: Bcenmc03_6117
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Entry
Bcenmc03_6117 CDS
T00669
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bcm
Burkholderia orbicola
Pathway
bcm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bcenmc03_6117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcm03021
]
Bcenmc03_6117
Transcription machinery [BR:
bcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bcenmc03_6117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_23
HTH_11
Sigma70_ECF
HTH_24
PhyR_sigma-like
MerR
HTH_3
HTH_17
CREPT
Rv2175c_wHTH
Phage_terminase
Sigma70_r3
HTH_29
HTH_40
HTH_28
FaeA
PCI
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
ACA95238
LinkDB
All DBs
Position
3:complement(109738..110289)
Genome browser
AA seq
183 aa
AA seq
DB search
MNYSSPISGSPTRCDVDDERTRSRAAWLTSEFRASYAWLKSKLQRRVGSPADAEDLASSS
FAELAGMQDLTAVRDARAFLTVIAQRLTYEMWRRRDLERAYLETLAHREEAVTPSAESMA
EVTQALLLVDQALNGLSPNAKSAFIMSQIDGLTHAEIAERLGVSVSMVRKYIAQALTQCY
LMA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaattacagttcaccgatcagtggctcccccacgagatgcgatgtcgacgacgaacgc
acgcgctcgcgcgcggcatggctgacgagtgaattccgcgcgagctatgcatggctgaag
tcgaaactgcaaaggcgcgtcggctcgccggccgatgcggaggatctcgcgtcgtcgtcg
ttcgcggaacttgccggtatgcaggacctgacagcggtgcgcgatgcacgggcctttctc
acggtcatcgcccagcgcctcacctacgagatgtggcgccgccgcgacctggaacgcgcg
tacctggaaacgctcgcccatcgggaagaagccgtcacgccgtcggcggaaagcatggcg
gaagtgacgcaggcgctcttgctcgtggatcaggcgttgaacggcctgtcacccaatgcg
aaaagcgccttcatcatgagtcagatcgacggcctcacgcacgctgaaatcgccgagcgg
ctcggcgtgtcggtgagcatggtccggaaatatatcgcgcaggcgctgacgcagtgctat
ctgatggcatga
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