Evansella cellulosilytica: Bcell_3512
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Entry
Bcell_3512 CDS
T01389
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
bco
Evansella cellulosilytica
Pathway
bco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bcell_3512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bco03019
]
Bcell_3512
03016 Transfer RNA biogenesis [BR:
bco03016
]
Bcell_3512
Enzymes [BR:
bco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Bcell_3512
Messenger RNA biogenesis [BR:
bco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Bcell_3512
Transfer RNA biogenesis [BR:
bco03016
]
Prokaryotic type
tRNA degradation factors
Bcell_3512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
OB_Dis3
HTH_NPRL3
OB_cyt-4
S1_RRP5
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ADU31754
UniProt:
E6TQX9
LinkDB
All DBs
Position
complement(3757484..3759862)
Genome browser
AA seq
792 aa
AA seq
DB search
MSEMTKERLLTFMKEEAVKPLAIKDIEEALGLSDSSQFKEFVKLLNELEEEGELVRTRSN
RYGIPDKMNLLRGEVIMHPKGFAFVKTEVEHDDVYIASAEMNGAMNKDKVLVRLHTGSTG
EKPEGAIIRILERGTTRTVGTYVDDKHYGFVVPDDKRIPNDIFIPKGSEGGAVDGHKVLV
EIVKYPEGRMSAEGHVLEVLGHKNDPGVDILSVIYKHGLPGEFDQETLDHANSVPNEIDP
SELENRRDLRDETIVTIDGADAKDLDDAVQVKKLENGNYLLGVHIADVSYYVKENSPIDK
EAAERATSCYLVDRVIPMIPHRLSNGICSLNPQVDRLTLSCNMEFSPNGELVNHEIFQSV
INTTERMTYTDVRKILQEEDEEVSKRYESLIPFFKGMEELAEILRNKRMARGAIDFDFKE
AKVLVDEDGTPTDVVMRERSVAERLIEEFMLAANETIAEHFHWMKVPFMYRIHEDPDEEK
LNKFLEFITNFGYVVKGAANTVHPRALQELLDQVKGEPEEAVISTVMLRSMRQAKYDPEN
VGHFGLSADFYTHFTSPIRRYPDLIVHRLIRTYLIEGKTDDKTIEKWNEKLYEIAKHSSE
MERRAEDASRETDELKKVQYMADKIGEEYDGMISGVTNFGIFVELPNTIEGLVHVSYLTD
DYYHYDEKQYAMIGERTGNVFRIGDEIEVRLINVNVDERIIDFEVVGMKPRKERRQDRPR
VIEGGIRPTRKKKGPGSEKDGDAKKGRRKKGQGQATGGNGGGSGNGGKKKKKKKFFENAP
ASKRKKGKKKRK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaatgacgaaagaacgactactgacttttatgaaagaagaggcagtaaaacca
cttgcgattaaagatattgaagaggcgctagggttatctgactcaagtcagtttaaagag
tttgtaaagcttttaaacgaattagaagaagaaggggagcttgtacgaacgagaagtaat
cggtacggcatacccgataagatgaatctactgcgtggagaagtaattatgcatccgaaa
ggctttgcatttgttaaaacagaagtcgagcacgatgatgtatacattgctagtgcagaa
atgaacggtgcaatgaacaaggataaagtgctcgtaagattacacactggctctacaggg
gaaaaacctgaaggggcaattatccgtattttagaaagaggaacaacaagaacagttggg
acatacgtagacgacaagcattatggttttgttgtcccagatgataagcgcataccaaac
gatatttttatcccaaaaggatctgaagggggcgctgtcgacggccacaaagtactcgtt
gaaatcgtcaagtaccctgaaggacgaatgagtgctgaagggcatgtacttgaagtgcta
gggcataaaaatgatcctggtgtcgatattttgtctgttatttacaagcatggacttcca
ggcgaatttgaccaagagactttagatcacgcaaattcagttccgaatgagattgatcca
tcagagctagaaaaccgtcgtgatttacgtgatgaaacaattgtgaccatagatggtgct
gatgcgaaagacttagatgatgccgttcaagtgaaaaaactagaaaacggtaactatctg
ctaggcgtacatattgcagatgtatcgtattacgtaaaggaaaactcacctattgataaa
gaggctgctgaacgtgcaacgagttgttatttagtggatcgagtgattccgatgatacca
cataggctatcaaatggaatttgttcattaaatccacaggttgaccgtctaacactatca
tgtaatatggagttttctccaaatggagagcttgtgaatcatgagattttccagagtgtc
attaacacgactgaacgtatgacttatacagacgttcggaaaatattacaagaggaagac
gaagaggtatcgaagcgctacgagtcacttataccatttttcaaagggatggaagagctt
gcggaaattcttcgaaataaaagaatggctcgcggagcaatcgactttgattttaaggaa
gcaaaggtactcgtcgatgaagatggtacacctacagacgtagttatgcgagaacgctct
gtagccgaacggttaattgaagagttcatgcttgcggcaaacgaaacaatcgctgagcat
ttccattggatgaaggttccattcatgtaccgtattcatgaagaccctgatgaagaaaag
ctgaacaagtttttagaatttattacgaactttggttatgtcgtgaaaggagctgcaaat
acagttcatccacgagcactccaagagcttttagatcaagtaaaaggtgagccagaagag
gctgtcatcagtactgtaatgctgcgctcaatgaggcaagcaaaatatgaccctgaaaat
gtaggtcacttcggtttatcagccgatttttatacacactttacatcaccaattcgccgc
tatccagatttaatcgtacatcgattgattcgtacgtatttaattgaaggaaaaacagac
gataaaacgatagaaaaatggaatgaaaagctatatgaaattgctaagcattcttcggaa
atggaacgccgtgcggaggatgctagtcgagaaacagacgaactgaaaaaagttcaatat
atggctgacaagataggcgaagaatatgatggtatgattagcggtgtaacaaacttcggt
atttttgtggagctaccaaatacgatcgaaggtcttgtacacgtgagctatttgacagac
gactactaccattatgatgaaaaacaatatgctatgattggggaaagaacagggaatgtc
tttcgaatcggcgatgaaatcgaagtgcgattgattaacgttaatgtagatgaacgtatc
attgactttgaagttgtaggcatgaaaccacgtaaggaacgtcgccaagatcgtccacgt
gtcattgaaggtggaattcgcccaacacgtaagaagaaaggtccaggtagtgaaaaagat
ggtgacgctaaaaagggtcgtcgtaaaaagggacaaggccaagcaactggtggcaatggt
ggcggatctggaaatggcggaaaaaagaaaaagaagaaaaagttctttgaaaacgcccca
gcgagtaaaaggaagaaagggaaaaagaagcggaagtaa
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