Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_1550
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Entry
BF29_1550 CDS
T03712
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bcoa
Heyndrickxia coagulans DSM 1 = ATCC 7050
Pathway
bcoa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BF29_1550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcoa03400
]
BF29_1550
Enzymes [BR:
bcoa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BF29_1550
DNA repair and recombination proteins [BR:
bcoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BF29_1550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AJH77272
UniProt:
A0A8B4BZ16
LinkDB
All DBs
Position
complement(1498274..1499137)
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AA seq
287 aa
AA seq
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MWEKIVKINGPYNFDRALERLSLDPLHALDPLRRTVKIPIYGKHPETSAITATGTTEAPA
FLIKGENPDTAEIVEKRIFHLFQWEKDLAGITNHFTGTALEPLFKEHRGTPFVLDFSPYA
CLVKCIIHQQLNMKFAHTLTERFVYHFGFQRDGVWFYPFPEKTAALQVADLRALQFSERK
AEYVIGLSKLVASGELDLAALEKEPDEEILKTLVKIRGIGPWTVQNFLMFGLGRLNHFPK
ADIGIQKALKKLFQLEKKPTYEEMDAYAKDWEPYLSYASLYLWRSIE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtgggagaaaatcgttaaaatcaatggcccgtacaattttgatcgtgcgctcgaaaga
ttaagcctcgacccgttgcatgcgctggatccgcttagacggacagtgaaaatcccgata
tacggcaaacatccggaaacatcggctatcactgcaaccggcacgacggaggcacctgca
tttctcatcaaaggcgaaaatccggataccgctgaaatcgttgagaagcggatttttcac
ctttttcagtgggagaaagacctcgcaggcatcacaaaccattttaccggcaccgccctt
gaaccgctttttaaagaacaccgcggtacaccgtttgtgctcgacttttcgccatatgcc
tgcctggtcaaatgcatcatccaccaacagctcaatatgaaatttgcccatacgctgaca
gagcgtttcgtgtaccattttggttttcaaagagacggtgtctggttttatccgtttcct
gaaaaaacggctgcattgcaagtcgcagatttacgcgccctgcagtttagcgagcggaaa
gcagagtatgtaatcgggctttccaaattggtggcatcaggcgaactggatctggcggca
cttgagaaggaaccggatgaggaaattttaaaaacgctcgtgaaaatccgcggcatcggc
ccgtggaccgtgcaaaattttctcatgttcgggctcggccgcctgaatcattttccaaaa
gctgacatcggcatacagaaggcattgaaaaaacttttccagcttgagaaaaaacctact
tatgaagaaatggacgcttacgcaaaagactgggagccttatttgagttatgcctccttg
tacttatggcgcagcatcgaatag
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