Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_188
Help
Entry
BF29_188 CDS
T03712
Symbol
sigD
Name
(GenBank) RNA polymerase sigma-D factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
bcoa
Heyndrickxia coagulans DSM 1 = ATCC 7050
Pathway
bcoa02020
Two-component system
bcoa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bcoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF29_188 (sigD)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BF29_188 (sigD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoa03021
]
BF29_188 (sigD)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bcoa02035
]
BF29_188 (sigD)
Transcription machinery [BR:
bcoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF29_188 (sigD)
Bacterial motility proteins [BR:
bcoa02035
]
Flagellar system
Flagellar assembly proteins
Stator
BF29_188 (sigD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HNF-1_N
PFO_beta_C
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AJH77140
UniProt:
A0A8B4BRV6
LinkDB
All DBs
Position
185050..185823
Genome browser
AA seq
257 aa
AA seq
DB search
MAEEPIQGEEQKDWDLWLKSRDPEAGNALVKRYMPLVSFHVQRIAAGLPRNVSKEDLKSL
GMFGLLDSLNKFDPSRELRFDTYASFRIRGAILDGLRKEDWLSRGTREKAKKIESAIEKL
EQKYLRAVSPKEVALELGMEETEVCTTMNEQFFANVLSIEETGTDNDEPEAASRLVSGER
NNGQPESELEKKETVKELAEAIRALSEKEQLVLGLFYQEECTLTEIGEVMGLSTSRISQI
HSKAIYKLRNILEKRLL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagccaatacagggtgaagagcagaaagactgggatttgtggcttaaatcc
cgtgatccggaagccgggaatgcccttgtgaaaagatatatgccgcttgtttctttccat
gtccaaagaattgccgccgggcttccccgcaacgtatcgaaagaggatttaaaaagcctc
ggcatgttcgggcttttggattcattaaacaaatttgatccgtcccgcgaactgagattt
gatacatatgcttcttttcggatccgcggcgcgattttggacggcctgcggaaagaagac
tggctgtcaaggggcacgagagaaaaagcgaaaaaaattgaaagtgccattgaaaagctg
gagcagaaatacttgcgcgccgtttctccgaaagaagtcgctttggagcttggcatggaa
gaaacggaagtctgcacaacgatgaatgaacagttttttgccaatgtcctgtcaatagaa
gaaacgggcaccgacaatgatgaaccggaagcggcatcccggctcgtgtccggggaacgg
aataatggccagccagaatccgaactggaaaagaaggaaaccgtaaaggaactggcagag
gccatccgtgccctgtcggaaaaagagcagcttgtgctgggcctcttttatcaggaagaa
tgcacgctgacagaaatcggcgaagtgatggggctttccacttcccgcatttcccagatc
cattcgaaggccatttataaactgcggaatattttggaaaaacggttgctgtaa
DBGET
integrated database retrieval system
