Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_2088
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Entry
BF29_2088 CDS
T03712
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
bcoa
Heyndrickxia coagulans DSM 1 = ATCC 7050
Pathway
bcoa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcoa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BF29_2088 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoa03021
]
BF29_2088 (rpoE)
03400 DNA repair and recombination proteins [BR:
bcoa03400
]
BF29_2088 (rpoE)
Transcription machinery [BR:
bcoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BF29_2088 (rpoE)
DNA repair and recombination proteins [BR:
bcoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BF29_2088 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
AJH77394
LinkDB
All DBs
Position
complement(2023378..2023953)
Genome browser
AA seq
191 aa
AA seq
DB search
MSLRQLPKEELKEMSFIELAEQILEEKKQVTSFQDLLAEIGAILGLPKEETESKMIQFYT
DLNIDGRFISLGDNTWGLRAWYPVDQIDEEVTHTVKTKRKKAKVVEEEEDFIDDEDLDLE
DIDDVAEDEEEDFADEDEEDEDLVEDEDLVDDEFSDIDEDEEETFEDEELLTDDFDVIED
EDEEDVNDKED
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttgcgacagttgccgaaagaagagctgaaggaaatgtcttttatcgagttggcg
gaacaaatattggaggaaaaaaaacaagtgacttccttccaggacttgcttgcggaaatc
ggcgccattttggggttgccgaaagaagaaaccgaaagcaaaatgatccagttctatacg
gacttaaatattgacgggagatttatcagcctgggggacaacacttggggtctccgtgcc
tggtacccggttgaccagattgacgaagaagtgacccacaccgtgaaaacgaagcggaaa
aaagcgaaagttgtcgaggaagaagaggactttatagatgatgaagaccttgaccttgag
gatatcgatgatgtcgccgaagatgaagaagaggacttcgccgacgaagacgaggaagac
gaagacctggtcgaagacgaagatttggttgacgatgagttttccgatatcgatgaagat
gaagaagaaactttcgaagacgaagaactgctcacggatgatttcgacgttatcgaagac
gaagacgaggaagacgttaacgacaaagaagattag
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