Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_2119
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Entry
BF29_2119 CDS
T03712
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bcoa
Heyndrickxia coagulans DSM 1 = ATCC 7050
Pathway
bcoa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BF29_2119 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcoa03400
]
BF29_2119 (ung)
Enzymes [BR:
bcoa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BF29_2119 (ung)
DNA repair and recombination proteins [BR:
bcoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BF29_2119 (ung)
Prokaryotic type
BF29_2119 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AJH79726
UniProt:
A0A8B4BYM2
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All DBs
Position
complement(2053454..2054140)
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AA seq
228 aa
AA seq
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MKDIFKNDWGPLLKEEFQKPYYLKLREFLKKEYATQRIHPDMFDIFNAFHYTAYRDVKVV
LLGQDPYHGPGQAHGLSFSVKPGVDIPPSLRNIFKELHDDVGCRIPQHGCLVSWAKQGVM
LLNTVLTVREGQAHSHQGMGWEIFTDEVIRKINAKETPVIFLLWGRPAQSKKALIDTNKH
FVLTAAHPSPLSAHRGFFGSRPFSKTNNILRKLGEKEIDWQLPEQEKL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacatttttaaaaatgattggggcccgcttttaaaggaggaattccaaaaacca
tattatttaaaattgagggagttcctcaaaaaagaatatgcaacacagcgaatccatcct
gatatgttcgatatctttaatgcttttcactatacggcttatcgggatgttaaggttgtc
ctccttggccaggatccttaccacggaccgggccaggcgcacgggcttagtttttcagta
aagccgggggtggatatccccccttcgctccggaatattttcaaagagctacatgacgat
gttggatgcaggattccgcagcacgggtgcttggtcagctgggcgaagcagggcgtgatg
ctgttaaacaccgtgttgactgtcagggaagggcaggcccattcacaccaaggaatggga
tgggaaatttttacagacgaagtgatccggaaaatcaatgcgaaagaaacacctgtcatt
tttctgttatgggggaggcctgcacagagcaaaaaagcgctgatcgacaccaacaaacat
ttcgttttaactgctgcccacccaagcccgttgtccgcccatcgcggttttttcgggagc
cgcccgttttcaaaaaccaacaatattttgcgcaagttgggagaaaaagagatcgactgg
cagctgccggaacaggaaaagctttaa
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