Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_2267
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Entry
BF29_2267 CDS
T03712
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
bcoa
Heyndrickxia coagulans DSM 1 = ATCC 7050
Brite
KEGG Orthology (KO) [BR:
bcoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcoa03016
]
BF29_2267 (trmE)
Transfer RNA biogenesis [BR:
bcoa03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
BF29_2267 (trmE)
Prokaryotic type
Methyltransferases
BF29_2267 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
GTP_EFTU
AIG1
Ras
MMR_HSR1_Xtn
cobW
Roc
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AJH79894
UniProt:
A0A8B4BUN2
LinkDB
All DBs
Position
complement(2199148..2200533)
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AA seq
461 aa
AA seq
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MEMDTIAAISTPMGEGAISIVRLSGENAISIANRLFAGVGGKKLADVPSHTIHYGKIVDP
DTAETIEEAMVSVMKAPKTFTREDVVEINCHGGLVAVNRVLQLVLKNGARLAEPGEFTKR
AFLNGRIDLSQAEAVMDLIRAKTDKAMNVAIGQMEGRLSKLVKRLRQEILEVVAHIEVNI
DYPEYDDVEEMTHRMLEEKAQYIKNEIEKLLRTAHQGKILREGLSTAIIGRPNVGKSSLL
NSLVQENKAIVTDIPGTTRDVIEEYVNVRGVPLRLIDTAGIRETEDIVERIGVERSRKAL
KEADLILLVINSSEPLSPEDEALFEAVEGMDVIVILNKWDLPHQVEMESVRELAQGAKIL
TTSLVTEEGMEKLEDAIAAMYFEGQMETGDLTYVSNSRHIALLNQALEAIQDVQNGIQSN
TPIDIIQIDLTRTWDLLGEIIGDTVQESLLNQLFSQFCLGK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggatacaattgcggcgatctcgacgccgatgggagagggagcgatttcgatt
gtccggctgagcggcgaaaatgcgatttcgattgcgaatcgattatttgcaggtgtcggc
gggaaaaaactggcggatgtcccttcgcacacgatccattacgggaaaattgtcgacccg
gacactgccgaaaccattgaggaagcgatggtgagcgtgatgaaagcgccgaaaacgttc
acgcgcgaagatgtcgtggaaatcaactgccatggtgggctcgtcgctgtaaaccgggta
ttgcagctcgttttaaaaaatggtgcgcgccttgctgagccgggtgagtttacaaaacgg
gcgtttttgaacggacgcattgatctgtcgcaggcggaagctgtcatggatttaatccgc
gctaaaacggacaaagcgatgaacgtggcgatcggccagatggaaggcaggttgtcgaaa
ctggtcaaaaggttgcgccaggaaatattggaagtcgtcgcgcatatcgaagtcaatatt
gattatccggaatacgacgatgttgaagagatgacgcaccgcatgctggaagagaaagca
cagtacatcaaaaatgaaatcgaaaaactgttgcggacagcgcaccagggaaaaattttg
cgggaagggttgtcaacggctattatcggccgcccgaatgtcggaaaatcatcattatta
aacagccttgtccaggaaaataaggccattgtcaccgatattcccggcacgacacgcgat
gtgatcgaagaatacgtcaatgtccgcggtgtgccgctgcgcctgattgacaccgcaggc
atccgcgaaacagaagatatcgtagaacgaattggtgtggaacgttcgcggaaagcgctc
aaggaagcggatttgattttgcttgttatcaactcatccgagccgctcagcccggaagat
gaggctttgtttgaagcggtggaaggcatggatgtgattgtcatcttaaataagtgggac
ctgccgcatcaagtggagatggaaagcgtccgcgaacttgcgcaaggcgcgaaaatcctt
accacgtcgcttgtaacggaggaaggcatggagaaattggaagatgcgattgctgcgatg
tattttgaagggcagatggaaacaggcgacctgacatatgtatcaaacagccgccatatt
gcgcttttgaaccaggcactagaagccattcaagatgtgcaaaacggcattcaatccaac
accccgattgatatcatccaaatcgacctgacccggacatgggacctgctcggcgaaatc
atcggtgacaccgtccaggaaagcttgttgaaccaactcttctcccaattctgcctcggg
aaataa
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