Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_308
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Entry
BF29_308 CDS
T03712
Symbol
topB
Name
(GenBank) DNA topoisomerase III family protein
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
bcoa
Heyndrickxia coagulans DSM 1 = ATCC 7050
Brite
KEGG Orthology (KO) [BR:
bcoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcoa03032
]
BF29_308 (topB)
Enzymes [BR:
bcoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BF29_308 (topB)
DNA replication proteins [BR:
bcoa03032
]
Prokaryotic type
DNA Topoisomerases
BF29_308 (topB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_RPB9
Zn_ribbon_Top1
Zn_ribbon_6
FYRC
Lar_restr_allev
DUF8594
Zn_ribbon_IS1595
Toprim_4
DUF7351
DUF7573
UPF0323
Motif
Other DBs
NCBI-ProteinID:
AJH78793
UniProt:
A0A8B4BRW6
LinkDB
All DBs
Position
complement(315862..317949)
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AA seq
695 aa
AA seq
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MKSLVLAEKPSVGRELARVLGCTENKKRYIEGPRYIVTWALGHLIELKMPEDYHPKYKEW
RMEDLPILPDKMETKTIRQTYPQYKVIEQLGKRSDIKDCIIATDAGREGELVARWILEKM
RWKKPVKRLWISSQTDKAIKDGFKQLKPAKQYDNLYRSAVCRSEADWLIGLNVSRALTVK
YNDPLSAGRVQTPTLAMVLEREREIQSFVPKKYWTIEALAGKLEVSYDHNGEKRIFDEQK
ANAIHAALSGQTAVVTQVIRKQKQEQQPLPYDLTELQRDANHRFGFTAKKTLNVLQNLYE
QHKLVTYPRTDSKYLTKDMENTMYDRLLAVKDAYKEEVQPVLSRKGNILAKRVINDAKVT
DHHAIIPTDERPALPDLSADERKIYDLIVKRFLALFYPVYEYETVQFKLQAGGKTLAGRT
MAVKNAGFTAVLHHEQERENTALLSIKEGKTFKLEQIRLSQHLTEAPKRYSEADILSRME
KYGLGTPATRADIIERLVSSETISRESGRLVPTPKGKQLIDLVNDELKSPELTAKWEEQL
EAIARGKGNPKQFLETIRRETVRLVREIRTSDKKYRAHNLTGTKCPECGSLMKEVNGKDG
KKLVCSNRECRFTKRKSPKLSNRRCPTCHKKMEIHHGKSGVYFQCRHCNIVQKADEKKKT
LSKHEEKKLLQKYTKKEESFGNSLADALKAALEKE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgcttgtactcgccgaaaagccgagcgtcgggcgcgaacttgcgcgcgtcctc
ggctgcacggaaaataaaaaacgttatattgaggggccgcgctatatcgtgacatgggcg
ctcggccatttgatcgaactgaaaatgccggaagattatcatccgaaatataaagaatgg
cgcatggaagacctgccgattcttccggataaaatggaaaccaaaacaatccggcagaca
tatccgcaatataaagtgatcgaacagctcggcaaaagaagcgacatcaaagactgtatt
atcgcaaccgatgccgggcgcgaaggcgaacttgtcgcacgctggattctggaaaaaatg
cgctggaaaaaaccggtaaaacggttatggatatcttcccagaccgacaaagcgattaaa
gacgggttcaagcaattaaaaccggcaaagcagtatgacaatctgtaccgctccgccgtc
tgccgcagcgaagcagactggctgatcgggttgaacgtgtcccgcgctttaaccgtgaaa
tacaacgacccgctctccgccgggcgcgtgcagacgccgacattggcgatggtgctcgag
cgcgaacgggaaatccagtcttttgtgccgaaaaaatactggaccattgaagcgctcgcc
ggaaaactcgaagtgtcatatgaccataacggcgagaaacggatatttgatgagcaaaaa
gcaaatgccatacacgcggctttatccgggcagactgccgttgtaacacaagtgatccgc
aaacagaagcaagagcagcagccgctcccttacgacttgacggaactgcaacgcgacgcc
aaccaccgcttcggttttacagcaaagaaaacattgaacgtgctgcaaaacttatatgaa
cagcataaactcgttacctatccgcgcaccgattcgaaatatttgacgaaagatatggaa
aacacgatgtacgaccggctgcttgcggtgaaagatgcgtacaaagaagaagttcagccg
gtcctttcccggaaaggcaacatactggccaaacgtgtcatcaatgatgcaaaggtgacg
gaccaccatgcgattattccaacggatgaacgcccggccttgccggatttatctgccgat
gaacggaaaatctatgatctgatcgtaaaacggttccttgcgctgttctacccggtttat
gaatatgaaaccgtccaatttaagcttcaagcaggcggaaaaaccctggccgggcggaca
atggccgtgaaaaatgccgggtttaccgctgttttgcaccatgaacaggaacgggaaaat
acggcgctgctttcgatcaaagaaggaaaaacatttaagctggaacaaatccggctcagc
cagcatttaaccgaagcaccgaaacggtattccgaagcggatattctttcgagaatggaa
aaatacgggctcgggacgccggcaacacgcgccgatatcattgaacggctcgtctcctcc
gaaacgatcagccgtgagtccggccgccttgtgccgacaccgaaaggcaagcagctgatc
gaccttgtaaatgacgagttgaaatcgccggaactgaccgcaaaatgggaagaacagctt
gaagcgattgcccgcggaaaaggcaacccgaagcagtttttggaaaccatccgccgggaa
accgtacgcctcgtccgtgaaatccggacgagtgacaaaaaataccgcgcccacaattta
acgggaacgaaatgcccggaatgcggttcccttatgaaagaagtaaacggcaaagacggg
aaaaagcttgtctgttcaaaccgggaatgccggtttacaaagcggaaaagcccgaaactt
tccaaccgacgctgcccgacctgccataaaaagatggagattcatcacggcaaatccggc
gtgtatttccaatgccgccactgcaatattgtccaaaaagcggacgaaaagaaaaaaact
ttgtcaaaacatgaagaaaagaaattgctgcaaaaatacacaaagaaagaggaaagtttc
ggcaacagcctggcagatgctttaaaagccgccttggaaaaagaatag
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