Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_3115
Help
Entry
BF29_3115 CDS
T03712
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bcoa
Heyndrickxia coagulans DSM 1 = ATCC 7050
Brite
KEGG Orthology (KO) [BR:
bcoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcoa03009
]
BF29_3115 (rumA)
Enzymes [BR:
bcoa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BF29_3115 (rumA)
Ribosome biogenesis [BR:
bcoa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BF29_3115 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_11
Ubie_methyltran
PrmA
Methyltransf_4
PCMT
Motif
Other DBs
NCBI-ProteinID:
AJH78722
UniProt:
A0A8B4BW36
LinkDB
All DBs
Position
3012847..3014241
Genome browser
AA seq
464 aa
AA seq
DB search
MAILQGESLITEIRDLDAKGSGQAVVWRENELGNAKKLKLTIPRTLPGEKVRVTVDQPEK
RRRKALPEEILEAHPERVAPMCPHFDRCGGCVWQHWAYEGQLKQKTAHVKEAIAAQGFDP
ALVRDTIGMDNPWHYRNKMEFTFAPDGSLGLHEQGNFRKVIPLETCLIAGKEMVDGAMEV
AAWVKGHGLKGYDKDAHEGLLRHLMVRQSFVTGEMMLALFATKAPDGELAEAARDLAERI
TGKFPQVKSLLWLENTDWADRTQAEKTHVLSGRDFIYDEMGGYRYRIWFDTFFQTNPVQA
QKLVDLALEMGRPEKTEKMIDLFCGVGTFSLPFADRVGELAGIEIVETSIESAKRNAKDN
GISNTYFLAKDARKGIDEVLESFGNPELLLLDPPRSGAGGKVMRKIGRAKPARIVYVSCN
PDTFATDIKELEPFGYKLTAVQPVDLFPHTVHVECVVLMSRVEK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ttggccattttgcaaggggaatcattgataacggaaatccgcgacctggatgcaaaaggt
tccgggcaggcggttgtctggcgtgaaaatgaacttggcaacgcgaaaaaattaaaactg
accattccgcgtacgcttccgggggagaaagtgcgcgtcaccgtggaccagccggaaaaa
agaagaagaaaggcactgccggaagaaattctcgaagcccatccggaaagggtggcgcca
atgtgcccgcactttgaccggtgcggtggctgtgtctggcagcactgggcatacgagggc
cagttaaagcaaaaaactgcccatgtaaaagaagccattgccgcacaaggctttgacccg
gcgcttgtccgtgatacgatcggcatggacaatccctggcactaccgcaataaaatggaa
tttacatttgccccggacggatcgctcggcctgcatgagcaagggaatttccggaaagtg
attccgcttgaaacctgcctgattgccggaaaagaaatggtggatggcgcgatggaagtg
gccgcatgggtaaaaggacatggcttaaaaggctatgacaaagatgcgcacgaaggcctc
ttacgccacttaatggtgcgccagtcttttgtaacaggggaaatgatgctcgccctgttt
gcaacaaaagcgccggacggggagctggctgaagcggcccgcgatttggcagaacggatc
accggcaaattcccgcaagtaaaaagcctgctctggctcgaaaataccgattgggcagac
cggacacaggcggaaaaaacacatgtcctctccggacgtgattttatttacgatgaaatg
ggcggttaccgttaccggatatggttcgatacatttttccaaaccaacccggtacaggca
cagaaactcgtcgatcttgcgcttgaaatgggccggccggagaaaacagaaaaaatgatt
gacctgttctgcggcgtcggcacattttctctgccgtttgcggaccgtgtcggggaactt
gccggcattgaaatcgtcgaaacctcgattgaatctgccaaacggaatgcaaaagacaat
ggcatttcaaacacatatttccttgccaaagacgcgcgcaaagggattgatgaagtgctg
gaaagcttcggcaacccggaactgctgctcctcgatcccccgcgttccggcgccggcggc
aaagtcatgcgcaaaatcggccgggccaaacctgcgcgcattgtctatgtctcctgcaac
ccggacacatttgcaacggatataaaagaactcgaaccgtttggctacaaactgactgcc
gtccagccggtggacttgtttccgcatacggtgcacgttgagtgcgtggtattgatgtca
agggttgagaagtag
DBGET
integrated database retrieval system
