Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_318
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Entry
BF29_318 CDS
T03712
Symbol
topB
Name
(GenBank) DNA topoisomerase III family protein
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
bcoa
Heyndrickxia coagulans DSM 1 = ATCC 7050
Brite
KEGG Orthology (KO) [BR:
bcoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcoa03032
]
BF29_318 (topB)
Enzymes [BR:
bcoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BF29_318 (topB)
DNA replication proteins [BR:
bcoa03032
]
Prokaryotic type
DNA Topoisomerases
BF29_318 (topB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AJH80135
LinkDB
All DBs
Position
324893..327046
Genome browser
AA seq
717 aa
AA seq
DB search
MIIAEKPDQGRTLCSVFPHVKREGYIEIRPNEIFPEGAFCTWAIGHLTQLVPPEHYNPAW
KQWKLETLPILPKKFKYEVTKPKYKQFQIVKKLVKDARVTNIIHAGDAGREGELIIRNIL
HLCGAKKPLRRLWISSLTPQSIREGFRHLLHDEDTRPLYDEAYARACADWLVGMNASRVY
SLLLRQKGMRDVFSVGRVQTPTLALIVKRELEIEHFKPEPFWEVTAMFQFDDKQYEGKWV
KDGESRLNDPAMAARIAAFCRQKPAEVAALKKEKKEFQPPLLFNLSSLQATANRAFQFPP
KKTLDLVQSLYQKGIVSYPRSDSQYVTKGEAETFPGILEKLSAFPEYAPYFPLPKRSILQ
NKRYVNEKKVSDHYAIIPTEQVAAPGSLPDGEKKIYDMIVRRLIAAHYGNAVFHYTTVKT
VVDSRAVFLSKGTQMEAEGWRKVIFSKEKEKGGVLPDVKQGEKGIVKDANVKEGKTQPPK
RYTEGQLITLMKTAGKYIEDGELEKVMAEVEGLGTEATRAGVITILKDRKYIEVKKNQVY
ATDKAKVLIRAIGGKILASPEMTAKWEKRLREIGKGAAEAAAFMEQTKKLSEKIVQDAVQ
AAAEWDFSGLKTDGIKRPGSKYTIGKKAGKCPTCGGDIVDKGNFYGCSAYRKSGCAFTLS
KSILGKKISLANARKLLAGEETSMIRGFRKNGKTFDAKLKWEDGKLRFIFAKQQTGR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
ttgatcatcgccgaaaagcctgaccaggggcgcaccctttgctcggtttttccgcatgtg
aaacgggaggggtatattgaaatccggccgaatgagatcttcccggaaggcgctttctgc
acgtgggcgatcggccatttaacccagctcgtcccgccggaacattacaatcccgcctgg
aagcagtggaaactggaaacgctgccgattctcccgaaaaaattcaaatatgaagtgaca
aagccgaaatacaagcaatttcaaatcgtcaaaaaactggtgaaagacgcacgcgtgacc
aatattatccatgcaggcgatgccggccgcgaaggagaactgatcatccgcaacatcctt
catttgtgcggcgccaaaaaaccgctacggcgcttgtggatctcgtctttaacccctcag
tcgatccgggaagggttccgccatttattacatgatgaagacacccgcccattatatgac
gaagcatatgcccgcgcctgtgcagactggctggtcggcatgaatgcctcccgtgtctac
agcctgcttttaaggcaaaaaggcatgcgtgatgtcttttccgtcggccgcgtccagacg
cctacgctcgctttaattgtaaaaagggagctggaaattgaacatttcaaacccgaaccg
ttttgggaagtcaccgcaatgtttcaatttgatgacaaacaatacgaaggcaaatgggtg
aaagatggcgaatcgcgtttgaatgacccggccatggcagcgcggattgccgcattttgc
cggcaaaaaccggcagaagttgcagcattaaaaaaagaaaaaaaggaattccagcccccg
ctgttgtttaacttatcatctttgcaggcaaccgcgaaccgggcttttcaatttccgccg
aaaaaaacgcttgatcttgtccaatccctctaccaaaaagggatcgtttcctatccccgt
tctgattcccagtatgtgacaaaaggggaagccgaaacttttcccggtattttggaaaaa
ttatctgccttcccggaatatgctccgtatttcccgcttccaaagcgctccatccttcaa
aataagcgttatgtgaatgagaaaaaggtttccgaccactacgcgattatcccgaccgaa
caggtggcggcgccaggcagtcttccggacggcgagaaaaaaatttatgatatgatcgtc
cgccgcctcattgccgcccattacggcaatgccgtttttcattacacgacggtgaaaacg
gtcgtggacagccgtgcagtctttctttccaagggtacgcaaatggaagcggaaggctgg
cgcaaagtcattttttcaaaagagaaggaaaaaggcggcgttttgccggatgtaaagcag
ggggaaaaagggattgtaaaagatgcaaacgtaaaagaaggcaaaacgcagccgccgaaa
cggtatacggaaggccagctcatcacgctgatgaaaacggccggaaaatatattgaggac
ggggaactggaaaaagtcatggcggaagtggaagggctcggcacggaagcaacaagggcc
ggcgtcattaccattttaaaagatcggaagtatattgaggtgaaaaagaaccaggtatat
gccaccgataaggcgaaagtgctcatccgtgccatcggcggcaaaattctggcctctccg
gaaatgaccgcaaaatgggaaaaacggctccgcgaaatcgggaaaggggcggccgaagca
gccgcttttatggaacagacgaaaaagctgtccgaaaaaattgtgcaagatgctgttcag
gcagcggccgaatgggatttttctggcttaaaaacggatggcatcaaaaggccgggatca
aaatatacaatcgggaaaaaagcgggcaaatgcccgacatgcggcggcgacattgttgac
aaaggcaatttttacggctgcagcgcctaccggaaatcgggctgcgcctttacgctgtca
aaatcgatccttggcaaaaaaatcagcctagccaatgcaaggaaactgctggccggcgaa
gaaacaagcatgatcaggggattccggaaaaatggcaaaaccttcgatgcaaaattgaaa
tgggaggacgggaaactccggtttatttttgcaaagcaacaaaccggccgctga
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