Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_3329
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Entry
BF29_3329 CDS
T03712
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB, AddA subunit
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bcoa
Heyndrickxia coagulans DSM 1 = ATCC 7050
Brite
KEGG Orthology (KO) [BR:
bcoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcoa03400
]
BF29_3329 (addA)
Enzymes [BR:
bcoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BF29_3329 (addA)
DNA repair and recombination proteins [BR:
bcoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BF29_3329 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Viral_helicase1
DEAD
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AJH79114
UniProt:
A0A8B4BR70
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All DBs
Position
3228707..3232456
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AA seq
1249 aa
AA seq
DB search
MKTAIPDKPANAVWTDDQWKAVMAKGQDILVAAAAGSGKTAVLVERIIQKILDDHDPLDI
DELLIVTFTNAAAAEMRHRIGKAIEEAISSRPDSHHLRKQLSLLNKAPISTLHAFCLEVI
RKYYYLIDIDPGFRIADDTEAELLRDEVLDDLFEAEYAKEGNDLFYRTVDTFSNDRSDDE
LQHLIRKLYDFSRSHPDPSAWLDKMVEMYDAGDVEEVDSLPFMAAVKEDIHLQLQAAKDM
LEEAYGLALEPGGPAPRAENYLDDIKIADRLLAAIHGPWQGLYEEMNAWHFTRAKACKGE
AYEEELVKAADDLRKSAKKTLEGLKKDFFSRKPASFLKDMQEMRPVIAELRTLVKKFADA
YGAVKAEKGIVDFSDLEHFCLDILAKKNEDGALIPSEAAKAYRQQFKEVLIDEYQDCNMV
QETIMNLVAKGAGFDGNRFMVGDVKQSIYRFRLAEPNLFLKKYRDFDPEGRDAGLRIDLS
KNFRSRKEILDGTNFIFKQIMGLKVGEIVYDSQAALVAGASYPEGDHPVKVALIDQADEA
IEEEDAPDEETLDRAELEQSQLEARYLAREIKKLIGEEQVYNPKTGTSRPIRYKDIVILM
RSMAWAPTIMEELKQAGIPLYTELSTGYFDATEVSIMLSLLKVIDNPYQDIPLAVVLRSP
IVGLDEEALALIRIHEKRGPYYEAFKKFIADRPNPGEEEAHEKVSRFMEKLAVWRSIARQ
GDLSSLIWQLYRDTQFYDFAGGLPGGKQRQANLRALYDRARQYEETSFRGLFRFLRFIER
MQERGDDLGTARALSEQEDVVRLMTIHASKGLEFPVVFVAGLNRKFNMRDISQAFLLDKD
FGFASKYIHPEKRITYPSLPQLAFKRKKKLEMLAEEMRVLYVALTRAKEKLYLVGTVKNL
GRRLEKWGKTRRQEGWLMPDHLRAAAGTYLDWIMPSLSRHADGTALFGDAGRVVLDDPSK
WQIAVLPKEQFADMPEPEQEGEADWQHQVKAGLPVAAESAYKAQVFGRLSFRYRNEPATF
RRAKQSVSELKRMHEEHDETNDTRFIPNAEKHIFDRPRFMQEKSTTPAERGTAMHMVMQH
IPFDAPPTYASVEALVEEMVKQELLTEEQADAIAAEQLVRFFETDIGRRVLAAGRVMREM
PFSLSVPAAEIYRDPSLAEEHVLIQGIFDCVAEEKDGLVLLDFKTDNIHGRFKGGFEEAE
PVLRKRYEVQLALYSRALETILKKKVKEQYLYFFDGGHLLQIQSRMGLL
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagccattccggataaaccggcgaatgccgtctggacggatgaccaatggaaa
gccgtcatggcaaaagggcaggacatcctcgtcgcggcggctgccggttcaggaaaaaca
gccgtgctcgtggaaagaattatccaaaaaatattggatgatcacgatccgctcgacatt
gatgaactgctcattgtcacttttaccaatgccgcggctgcggaaatgcgccaccgcatc
ggtaaagcgatcgaggaggcgatcagcagccgcccggattcgcatcatttgcggaaacag
ctgagcctgctgaataaagcgccgatttccacgctgcacgccttctgccttgaagtgatc
cgaaaatattattatttgattgacatcgaccccggattcaggatcgccgatgatacagaa
gccgaacttctgcgcgatgaagtgctggatgacctctttgaagcggagtatgcgaaagag
ggaaatgacctgttttaccgcacagtggatacattttcaaacgaccgcagtgatgacgag
ctccagcatctgatccggaagctttacgacttttcccgttcccatccggatccgtctgca
tggcttgataaaatggtcgaaatgtatgatgccggggatgtggaagaggtggacagcctt
ccgtttatggcagcggtgaaagaagatatccacctccagctgcaggctgcaaaagacatg
ctggaggaagcgtatgggcttgctttagagccgggcgggcctgcgccaagggcggaaaat
tatctcgatgacataaaaattgcagacagattgcttgcggccattcacggtccctggcag
gggctttatgaagaaatgaatgcatggcactttacacgcgccaaagcgtgcaaaggggag
gcatatgaagaggagctcgttaaagcggccgatgatttgcggaaatctgcaaagaaaaca
cttgaaggtttaaaaaaagactttttctcaaggaagccggcgtctttcctgaaagacatg
caggaaatgcggccggtgattgcggaacttagaacgctcgtgaaaaaatttgcggacgca
tacggcgcggtaaaagcagaaaaagggatcgtcgatttttcggacttggagcatttttgc
ctggacattcttgctaaaaaaaatgaagacggcgccctcatcccatcagaagcggccaaa
gcttaccggcagcaatttaaagaagtgctgattgacgaatatcaggattgtaatatggtg
caggaaacgatcatgaatcttgtggcaaaaggggcgggatttgacggcaaccggtttatg
gtcggagacgtaaaacaaagcatctaccggttccggcttgctgagccgaacctgttttta
aaaaagtaccgggattttgatccggaaggccgggatgcaggcctcagaatcgacttgtcg
aaaaacttccgcagccgcaaagaaattctcgacggcacgaattttatttttaaacaaatc
atgggcctaaaggtgggcgagattgtctatgacagccaggctgcacttgtggcaggcgca
tcttatccggaaggggatcatccggtcaaagtggcattgattgaccaggccgatgaagcc
atcgaggaggaagacgcaccggatgaagaaacgctggaccgggccgaattggaacaatcc
cagcttgaagcccgttatcttgcccgtgaaataaaaaaactgatcggcgaagaacaggtt
tacaatccgaaaaccggcacatcccgcccgatccggtacaaagatatcgttatcctgatg
cgttccatggcatgggcgccgaccataatggaagagttgaaacaggcgggcatcccgttg
tacacggaactttcaaccggttattttgacgcgacggaagtatccatcatgctttcttta
ttaaaagtaattgacaacccgtatcaggacattccgcttgcagtcgtgctccgttccccg
attgtcgggctcgatgaagaggcgcttgcccttatccgcatccatgaaaaacggggcccg
tattatgaagcgtttaaaaaatttatagcagacaggccgaatcccggggaagaagaagcg
catgagaaagtatccagattcatggagaaattggcggtatggcggtctattgcaaggcag
ggggatttgtcctcactcatttggcagctgtaccgggatacgcagttttatgattttgcc
ggcgggctgccgggaggaaagcagcggcaggccaatttgcgggctttgtatgaccgggcc
cggcaatatgaagaaacgtctttcagggggctgttccggtttttgcgttttatcgaacgc
atgcaggagcgcggggatgacctcggaacagcgagggcattgagcgaacaggaagatgtt
gtccgcctgatgaccatccatgcaagcaaagggctcgagttcccggtcgtgttcgtggca
ggcctcaacaggaaatttaatatgcgcgatatcagccaggcatttcttctagataaagat
ttcgggttcgcctcaaagtacattcatccggaaaaacggatcacatatccgtccttgcca
cagcttgcctttaaaagaaagaaaaagctggaaatgctggctgaagaaatgcgcgtcttg
tatgtcgcgctcacaagggcaaaagaaaaactgtatttggtcgggacggtgaaaaatctg
ggcagacgcctggaaaaatgggggaaaacgaggcggcaggaaggctggctgatgccagac
catctgcgcgcagcggccggcacttatttggactggatcatgccttcgctcagcaggcat
gcggacggaacagcgcttttcggggatgccggccgggtggtgctggatgatccgtccaaa
tggcagatcgccgttttgccgaaagaacagtttgccgatatgccggaaccggaacaagaa
ggggaagcagactggcagcatcaagtgaaagccggcctcccggttgcggcggagtccgca
tataaagcgcaagttttcgggcgcttaagtttccggtaccgtaatgagccggcaacattc
cggcgtgccaaacaatcggtatcggaattgaaacggatgcatgaagagcatgatgaaacg
aatgacacccggtttattccgaatgcggaaaaacatatctttgaccgcccccgttttatg
caggaaaaatcgactacgccggccgaacgcgggacagcgatgcatatggtgatgcagcat
atcccgtttgatgcgccgccgacttatgcttccgttgaagcactggttgaagagatggtg
aaacaggagctgctcacggaagaacaggcggatgccattgcggctgaacagcttgtccgc
ttttttgaaacggatattggccgccgtgtccttgcagccggccgggtgatgcgggaaatg
ccgttcagtttatccgttcccgcggcggaaatttaccgggatccatcccttgcggaagaa
catgtccttatccagggcatatttgattgcgtggcagaggaaaaagacggcctcgtattg
ctcgattttaagacagacaatatccacggcaggtttaaaggcggatttgaagaagcagag
cctgtcctgcgcaaacgttatgaagtccagcttgccctttactcaagggcgctggaaacc
attttaaagaaaaaggtaaaagaacaatacttgtatttctttgatggcgggcatcttctt
caaattcaatcaagaatgggcctcctttaa
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