Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_809
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Entry
BF29_809 CDS
T03712
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bcoa
Heyndrickxia coagulans DSM 1 = ATCC 7050
Pathway
bcoa03030
DNA replication
bcoa03430
Mismatch repair
bcoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BF29_809 (holA)
03430 Mismatch repair
BF29_809 (holA)
03440 Homologous recombination
BF29_809 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcoa03032
]
BF29_809 (holA)
03400 DNA repair and recombination proteins [BR:
bcoa03400
]
BF29_809 (holA)
Enzymes [BR:
bcoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BF29_809 (holA)
DNA replication proteins [BR:
bcoa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BF29_809 (holA)
DNA repair and recombination proteins [BR:
bcoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BF29_809 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF34_NIF3
Motif
Other DBs
NCBI-ProteinID:
AJH77526
UniProt:
A0A8B4BTH6
LinkDB
All DBs
Position
complement(784687..785712)
Genome browser
AA seq
341 aa
AA seq
DB search
MDELWKKIERGQFSPLYLLYGAEDYFIQKTKQKLLDYALTPEEADFNYASYDLEEVPVET
AIEDAETFPFMGERRLVIAHHPFFLTAEKQKQKVEHRLDKLEAYVKSPAPYTVFVLVAPY
EKLDERKKLVKLIKKQAATFQAKKLNERELEGWLVSRAAEEGCRIGRKAVEHLVSLAGTN
MNALDHEINKLALYAGSGNEITDGMVEMLTARSLEQNVFELVEKVVHRRIDEALRIYYDL
LKLNEEPIKILALLAGQFRLIYQTKELARLGYGQQQIASYLKVHPYRVKLAAGQAGLFSA
DELNRIMALLADSDYRMKSGGLKKEMIIEMFLFQLHEMKAK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattatggaaaaagattgagcgcgggcaattttccccgctttatttattgtac
ggcgcagaagattatttcattcaaaaaacgaaacagaaattgctggattatgcgctcact
ccggaagaggcggattttaattatgcttcgtatgacctggaggaggtgccggtcgagaca
gcgatcgaagatgcggaaacattcccttttatgggggagaggcggctcgtgattgcgcac
cacccgttttttttgactgctgaaaagcagaaacagaaagtggaacaccggctggacaag
ctggaagcatacgtgaagtctcccgccccttacacggttttcgtgctggttgcgccttat
gaaaaactggatgaacggaaaaaactggtgaaattgatcaaaaagcaggccgcaactttc
caggcaaaaaaattaaatgaaagggagcttgaagggtggcttgtctcccgcgccgctgaa
gaaggctgccggattggcaggaaggcagtggaacatttggtttcccttgccggcaccaat
atgaatgcgctcgatcatgaaataaataagctagctctatatgccggaagcggcaatgaa
ataacagatggaatggtggaaatgctgacggcgcggtcgctggagcaaaatgtatttgaa
ctcgttgaaaaagtggttcaccgccgcattgatgaggcgctccggatctattatgacctt
ttaaaacttaatgaggagccgattaaaatattggcgctccttgccggccagttccggctc
atctaccagacgaaagaactggcgaggctcggctacggccagcagcaaatcgcatcttat
ttaaaagtgcatccatacagggtaaaactggcggcggggcaggcggggcttttttccgcg
gatgaactgaaccggatcatggcgctgcttgccgacagcgactaccggatgaaatcgggc
gggctgaaaaaagaaatgatcattgagatgtttttgtttcaactgcatgaaatgaaggca
aaataa
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