Blautia producta DSM 935: BLCOC_03270
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Entry
BLCOC_03270 CDS
T09601
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bcoc
Blautia producta DSM 935
Pathway
bcoc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BLCOC_03270 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoc03021
]
BLCOC_03270 (rpoC)
03400 DNA repair and recombination proteins [BR:
bcoc03400
]
BLCOC_03270 (rpoC)
Enzymes [BR:
bcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BLCOC_03270 (rpoC)
Transcription machinery [BR:
bcoc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BLCOC_03270 (rpoC)
DNA repair and recombination proteins [BR:
bcoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BLCOC_03270 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
WPX72003
UniProt:
A0ABZ0U5X9
LinkDB
All DBs
Position
367420..371136
Genome browser
AA seq
1238 aa
AA seq
DB search
MPETANKEAYQPMTFDAIKIGLASPEKIRDWSRGEVKKPETINYRTLKPEKDGLFCERIF
GPSKDWECHCGKYKKIRYKGVVCDRCGVEVTKASVRRERMGHIELAAPVSHIWYFKGIPS
RMGLILDLSPRSLEKVLYFANYIVLDAGTTELQYKQVLTEKEFQDAREKYGDGAFRVGMG
AESVMELLEAIDLERESKELKAGLKDSTGQKRARIVKRLEVVEAFRESGNRPEWMIMTVV
PVIPPDLRPMVQLDGGRFATSDLNDLYRRIINRNNRLKRLLELGAPDIIVRNEKRMLQEA
VDALIDNGRRGRPVTGPGNRALKSLSDMLKGKSGRFRQNLLGKRVDYSGRSVIVVGPELK
IFQCGLPKEMAIELFKPFVMKELVSNGTAHNIKNAKKMVEKLEPEVWDVLEDVIKEHPVM
LNRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAFNADFDGDQMAVHLPLSVEAQAECRF
LLLSPNNLLKPSDGGPVAVPSQDMVLGIYYLTQERPGVKGEGKYFKSVNEAILAYENGYI
TLQTRIHVLCSKTQPDGTVMEDMVDSTLGRFLFNEIIPQDLGFVDRSVPGNELKLEVDFL
VGKKQLKQILEKVINTHGATRTAEVLDKIKATGYKYSTRAAMTVSISDMTVPPQKPEMIQ
KAQDTVDLITKNFKRGLITEEERYKEVVETWKKTDDELTKALLTGLDKYNNIFMMADSGA
RGSDKQIKQLAGMRGLMADTTGHTIELPIKSNFREGLDVLEYFMSAHGARKGLSDTALRT
ADSGYLTRRLVDVSQDLIVREVDCCEDRGEIPGMWVKAFMDGKEEIESLQERITGRFSCE
TIKNAKGEVIVKANHMITPKRAARVVNEGVKEDGKSYDSVKIRTILTCKCHIGVCAKCYG
ANMATGEPVQVGESVGIIAAQSIGEPGTQLTMRTFHTGGVAGGDITQGLPRVEELFEARK
PKGLAIITEIKGIATLKDTKKKREIIVTDNEDGNSKTYLIPYGSRIKVQDGQYLEAGDEL
TEGSVNPHDILKIKGVRAVQDYMIQEVQRVYRLQGVEINDKHIEVIVRQMLKKIRIEDNG
DTEFLPGTLVDVLDYEEENEKLIEEGKEPADGKQVMLGITKASLATNSFLSAASFQETTK
VLTEAAIKGKIDPLIGLKENVIIGKLIPAGTGMKCYSNIKLDTDLAEDEEDYDEDELELA
EALDVLPAEDEEEVLQLTDEVDEVELSEEEEEAELTEE
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaacagcaaataaagaggcatatcagccgatgacctttgatgccatcaaaatc
ggattggcgtccccggagaaaatccgggactggtccagaggcgaggttaaaaaaccggaa
accattaactatagaaccctgaaaccggaaaaagacggcctgttctgcgagaggattttc
ggaccgagcaaagactgggaatgtcactgcggtaaatacaagaaaatccgttataaaggc
gttgtctgtgaccgatgcggcgttgaggtgacaaaagccagcgtccgcagggagcgcatg
ggccatattgaactggcagcaccggtctcccatatctggtacttcaagggtattccgtcc
agaatgggactgatcctggatctttccccgagatccctggaaaaagtcctgtactttgcc
aactatatcgtactggacgcaggcaccacggaactgcagtacaaacaggtactgacagag
aaagagttccaggatgccagagaaaaatacggtgacggcgcattccgtgtaggaatggga
gcagagtctgttatggaactgctggaggctattgacctggaaagagaatccaaagagctg
aaagcaggcctcaaggattccacaggccagaagcgcgcacgtatcgtaaagcgtcttgag
gttgtggaagctttccgtgaatccggaaaccgtccggagtggatgatcatgacagttgtg
cctgtaattccgccggaccttcgtcctatggttcagctggacggcggacgtttcgccaca
tccgacttaaatgatttatatagaaggatcatcaacagaaataaccgtctgaaaagactg
cttgaactgggcgctcctgatatcattgtccgcaatgagaagagaatgctccaggaagct
gttgatgccctgattgacaatggacgccggggccgtccggtcacaggaccgggtaaccgt
gcgctgaagtccctttccgatatgctgaaaggtaaatcaggccgtttccgtcagaacctt
ctgggtaaacgagttgactactcaggccgttctgttatcgtggttggacctgaattgaag
atattccagtgcggtctgccaaaagagatggcgattgagctgttcaagccttttgttatg
aaagagctggtgagcaacggcactgcccataacattaagaatgccaagaagatggtagag
aagctggaacctgaagtatgggatgttctggaagatgtcatcaaagagcatcctgtcatg
ttaaaccgtgctcctacactgcatcgtctgggtatccaggcatttgagcctattctggtt
gagggtaaagcgatcaagctgcatccccttgtatgtaccgcgttcaacgccgactttgat
ggtgaccagatggctgttcatcttcccctgtccgttgaggctcaggcagagtgccgtttc
ctgcttctgtctccaaacaacctgctgaaaccgtctgacggtggtccggtggctgttcct
tcacaggatatggtccttggtatctactatctgacacaggagagaccgggcgttaaaggt
gaaggcaaatatttcaagagcgtaaatgaagccatcctggcttatgaaaacggatatatt
acactgcagaccagaattcatgtactttgcagcaagacacagccggacggcaccgtaatg
gaagacatggtggattccacactgggacgtttcctgttcaatgaaatcattccgcaggat
ttaggttttgtggaccggtctgtaccgggcaatgaactgaagctggaagttgatttcctg
gtaggcaagaaacagttaaaacagattctggaaaaagtaatcaatacccacggcgctacc
agaaccgcagaggtgctggataagatcaaagccacaggttacaaatactcaaccagagct
gccatgaccgtatctatctctgatatgacagtgccgcctcagaaacctgagatgatccaa
aaggcacaggatacggttgaccttatcaccaagaacttcaaacgtggtcttatcacggag
gaagagagatataaagaagtagttgagacatggaagaagaccgatgatgagcttaccaaa
gccctgctgacaggacttgataagtacaacaacatctttatgatggctgactccggtgcc
cgtggttccgataagcagatcaaacagcttgccggtatgcgtggtctgatggctgatacg
acaggtcacaccatcgagctgcccatcaagtcaaacttccgtgagggtcttgacgtactg
gaatacttcatgtccgctcatggtgcacgtaaaggtctgtctgatacagccctgcgtacc
gctgactccggttacctgacaagacgtctggttgacgtttcccaggatctgatcgtccgg
gaagtggactgctgtgaagacagaggcgagattccgggtatgtgggtaaaagccttcatg
gacggaaaagaagagattgaaagtcttcaggaacgtatcacaggacgtttctcttgtgag
accatcaagaacgccaaaggcgaagtgatcgtcaaggcaaaccatatgatcactccaaag
cgcgccgcacgtgtggtcaatgagggagtgaaagaggatggcaaatcttatgattccgtt
aagatccgtactatcctcacatgtaagtgccatatcggtgtgtgtgcaaaatgctacggt
gccaacatggcaaccggtgagcctgttcaggtaggtgagtctgtaggtattatcgcagcc
cagtctatcggtgaaccaggtacacagcttaccatgcgtaccttccataccggtggtgtt
gccggcggcgatatcacacagggtcttccccgtgtggaggagctttttgaggcaaggaag
ccgaaaggtcttgcaatcatcacagagatcaaaggtattgcaacactgaaggatacaaag
aagaaacgtgaaatcatcgttacagataatgaggacggtaactccaagacttacctgatt
ccttacggctctcgtatcaaggttcaggacggacagtatctggaggccggtgatgagctg
acagagggtagtgtcaatcctcatgacattctgaagatcaagggcgttcgtgctgttcag
gattatatgatccaggaagtacagcgtgtataccgtctgcagggtgttgagatcaatgat
aagcatatcgaggttatcgttcgccagatgctgaagaagatccgcatcgaggacaacgga
gatacagaattcctgccgggtaccctggttgacgttctggactacgaggaagagaacgag
aagctcatagaagagggcaaagaaccggcagacggaaaacaggtaatgctgggtatcacc
aaagcatctctggcaaccaactccttcttgtccgcagcttccttccaggagaccacaaag
gttctgactgaagcagccatcaagggcaagatcgatccactgatcggtctgaaagagaat
gttatcatcggtaaactgattcctgcgggaacaggaatgaagtgctactccaacatcaag
ctggatacagatttggctgaggatgaagaagattatgatgaggatgaactcgaactggcg
gaagcactggatgtacttccggctgaggatgaagaggaagttctccagttgacagatgag
gtggatgaggtggaactttccgaggaggaagaagaagccgaattgacagaagaataa
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