Sutcliffiella cohnii: BC6307_04915
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Entry
BC6307_04915 CDS
T06787
Name
(GenBank) ATP-dependent DNA helicase Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcoh
Sutcliffiella cohnii
Pathway
bcoh03420
Nucleotide excision repair
bcoh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BC6307_04915
03430 Mismatch repair
BC6307_04915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcoh03400
]
BC6307_04915
Enzymes [BR:
bcoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BC6307_04915
DNA repair and recombination proteins [BR:
bcoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BC6307_04915
MMR (mismatch excision repair)
Other MMR factors
BC6307_04915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DEAD
DTW
Motif
Other DBs
NCBI-ProteinID:
AST90670
UniProt:
A0A223KMD6
LinkDB
All DBs
Position
complement(1015824..1018124)
Genome browser
AA seq
766 aa
AA seq
DB search
MKLAIWKSQPISLNKIARERYQQIYELGQRYELTCSICSTRVKMYLGIYEEPHFYPVDKS
INHEECERKAATMESPIVEIEESASYLEQNGFRIPKSRSISTQPSIDQTSWKAPKYISNL
PIYLQNITNTPAPESPFWEQLLKKNIVLDFSQREAVKHVDGPLLVLAGAGSGKTRVLTTR
VAYMIGEQKIDPRSIMLVTFTAKAAQEMKERLSLYTNRASMNGVVAGTFHSIFYRIVSHH
EPSRWNHEKLLKWEWQKEQFLKQTGRSLGLDEKEFPWDEAIQMISYWKNNLQFPNDIKAS
NKTEEDYLHLYKEYEQWKKTNEFFDFDDMLIGCYELFTRDENLLQKYQQRFQYFLIDEFQ
DINKVQYETIKLLAKSKNLCVVGDDDQSIYAFRGSDPSYIVNFDRDFPTTKVVTLSENYR
STHAIVASANKVIAHNKKRKQKSMNAQVDNKKSPLLFFPHDEEEEATMIVQDMKERIENG
DNPNDFAILYRTHSAARAIFERLTQSGLPFSIDQDYDSFYNRRIVKSMIAFLRLSHDKND
VKALTDILPALFLKQSSLQDAKAISILEDCDLAVALSKISNIAPFQAKKLKKLVPLFSSL
QAVTPTVALEIIEKDMGFSDYVKKRGNEGNMVEKGSDDVRDLKVVAKKFSTVEDFLAHID
DMIAKTTEMKKLSKQFKDAIRLSTIHRAKGLEYKKVYILSVVDGGIPHDFALEDVRNGDY
HSLEEERRLLYVAMTRAKEELFLSVPQNRRGKKAYLSRFIKQILPN
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagcaatctggaagagtcaacctatttctcttaataaaattgcgagagaacgg
tatcagcaaatatatgaacttggacaacgttatgaactaacatgttcaatttgttcaaca
cgagtaaaaatgtatttaggtatttatgaagagcctcatttttacccagtcgacaaatcc
attaatcatgaagagtgtgaacgaaaagcggctactatggagtcgccgatagtcgaaata
gaagaaagcgcatcgtatttagaacagaatgggtttcgaattccgaaatcacgttctatt
tctactcaaccctccatcgatcaaacatcgtggaaagcacctaaatacatttccaattta
ccaatatatttacaaaatattacgaacactccagcgccagaaagtccgttctgggagcaa
ctattgaaaaaaaatattgttctagacttttcccagcgtgaagcagtaaaacatgttgac
gggccgttgctcgttttagcaggtgctggtagtggaaagacaagagttttaactacaaga
gtcgcttatatgattggagaacagaaaatagaccctcgttcgattatgcttgttacgttt
acagcgaaagcagctcaagaaatgaaagagcggttatcactatatacgaaccgtgcttcc
atgaatggcgtagtagctggcacatttcatagcattttttaccgaatcgtaagccaccat
gaaccaagccgctggaaccatgaaaagctattaaaatgggaatggcaaaaggagcaattt
ttaaagcaaactggtcgcagtctcggcctagacgaaaaggaattcccttgggacgaagca
atccagatgatcagttattggaaaaacaatttacaatttccaaacgacattaaagcttct
aacaaaacggaggaagactaccttcatttatataaggaatatgaacagtggaaaaaaaca
aacgagttcttcgactttgatgatatgctgattggctgttacgaattattcactcgagat
gaaaacctactacaaaaatatcagcaacgctttcaatattttttaatagatgaatttcaa
gatattaataaagttcaatatgaaacgattaaattattagctaaaagtaaaaatttatgt
gtggtcggtgacgatgaccaatccatctatgcgtttagaggaagcgacccgtcctatatc
gtaaatttcgatcgagattttccaactacaaaagtagttacactgtctgaaaactatcga
tccacacatgcgattgttgcctctgctaataaagtaatcgctcataataaaaagagaaag
caaaaaagtatgaatgcgcaagtagataataaaaagtctccccttcttttctttcctcac
gatgaggaagaggaagcgacaatgatcgtgcaagatatgaaagaacgaatagaaaatgga
gacaatcctaacgattttgctattctatacagaactcatagtgcagcccgtgctattttc
gaacgacttacacaatctggcttaccattttcaattgaccaagactatgatagtttttat
aatcgtcgcattgtgaaaagtatgattgcttttttaagactcagtcacgataaaaatgat
gtaaaggcgttaacagatattttgccagctctatttttaaagcagtctagtttacaagat
gcgaaagctatatcgatactagaagattgtgatttagctgtcgcattatcgaaaatatct
aatattgcaccatttcaagcgaaaaagttaaaaaagctcgtcccacttttctcctcgtta
caagctgtgactccaacggttgcacttgaaataattgagaaggacatgggattttccgat
tatgttaaaaagcgcggcaacgaagggaatatggttgaaaaaggatctgacgatgtacgt
gatttgaaggttgtcgctaaaaagttttcgacagttgaagatttccttgcacatattgat
gatatgattgccaaaacaacggaaatgaaaaaactaagcaaacagtttaaagatgcaata
cgcctttccactattcatcgtgcaaaaggacttgaatataagaaagtatatattttaagt
gttgtcgacggtggtattccccatgactttgctttagaggacgttcgtaacggtgactat
cattcattagaagaagagcgaagacttttatacgttgcgatgactcgtgcaaaggaagag
ttgtttctttccgtcccacaaaatagacgtggaaaaaaagcgtatttatcgaggttcatc
aaacaaatactgccaaattaa
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