Sutcliffiella cohnii: BC6307_06460
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Entry
BC6307_06460 CDS
T06787
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bcoh
Sutcliffiella cohnii
Pathway
bcoh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcoh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BC6307_06460
09124 Replication and repair
03420 Nucleotide excision repair
BC6307_06460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoh03021
]
BC6307_06460
03036 Chromosome and associated proteins [BR:
bcoh03036
]
BC6307_06460
03400 DNA repair and recombination proteins [BR:
bcoh03400
]
BC6307_06460
Enzymes [BR:
bcoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BC6307_06460
Transcription machinery [BR:
bcoh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BC6307_06460
Chromosome and associated proteins [BR:
bcoh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BC6307_06460
DNA repair and recombination proteins [BR:
bcoh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BC6307_06460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
TOE2_C
ATP-cone
Motif
Other DBs
NCBI-ProteinID:
AST90947
UniProt:
A0A223KNH1
LinkDB
All DBs
Position
complement(1351234..1353507)
Genome browser
AA seq
757 aa
AA seq
DB search
MKINISVRSLVEYVFRSGSIETGFRTATTMTEGTKAHQKIQKTYGENDQKEVYVQTEFLY
EDIVIQVDGRCDGLLVQEDGSVVIDEIKSTAHSLDYMTETSHPVHWAQAIFYGFIYAKDN
ELDSITIQLTYFQVHTEVKKQFQRSMSFKELTAYVEEVIITYGKYAKARKIHLTKRNETS
KQLVFPFQEYRAGQRQLAGAVYKSIVDQKNLFARASTGIGKTISTIFPSIKAIGEEHVER
IFYLTARTITRTAAEEAFQRLIDLGLHINVVTLTAKDKICFQEEMNCSKEHCPFSEGYYD
RINEAVLDILTNEKLITRTIIEAYARKHSVCPFEYSLDVAYSADVVICDYNYIFDPKVSL
KRLWDEQKKKTVLLIDEAHNLVDRGREMFSSSINKASFLQIKRDYTKMNDTLSKAAKLVN
DYLLSVKKKETFQIKELDEEVVQLLETFIEEAEMVLIQQSDGNEILLETYFAAQSFVKIS
KLYDERFVTYVEVNKSEVTMKLFCLDPSELLQKTRKSFRSTIFFSATLSPTDYYQNLLGG
RSEDYVMSIPSPFPRENAEIIIQPLSTKYHDRERTMGPMIQFMLEILSNRAGNFLVFFPS
YAYMRAVYEQFIVTAPDVPTIIQDVGMSESERERFLESFQADNVERLVGFAVLGGIFSEG
VDLVGERLQGVIIVGVGLPQIGVERDIIKDYFQFIGKNGFDYAYVYPGMNKVLQAGGRLI
RSDSDTGTILLIDDRFLQRKYQSLLPLEWQHYTVRRT
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaatatttcagtaagaagtttagtagagtatgtattccgatctggcagcatc
gagactggtttccgtactgcaactactatgacagagggtacgaaagcccatcaaaaaata
cagaaaacatacggtgaaaatgaccaaaaagaagtgtatgtgcaaaccgaatttctttat
gaagatattgtcattcaagtagacgggcggtgtgacgggttactcgttcaagaagacggt
tctgtcgttattgatgaaataaagtcaaccgcccattctcttgattacatgacggaaact
tctcaccctgttcattgggcacaagcaatattttatggatttatttatgcaaaagacaat
gagctagactccattacgatacaattaacgtattttcaagttcatacagaagtaaagaag
cagtttcaacgtagcatgtcgttcaaagagctcaccgcttatgtcgaagaagtcatcatt
acttatggaaaatatgcgaaagcacgaaaaattcatctaacaaagcgaaatgaaacgagt
aaacaattagttttcccctttcaagaataccgagcagggcagcggcagctagctggggct
gtttataaatctatcgttgatcagaaaaacttatttgcaagagcatctaccgggatagga
aaaacaatatcaactatattcccgtctataaaggcaattggcgaagaacatgttgagcgc
attttctacttaacagcgagaactattactagaacggctgcagaagaagcgttccagcgc
ttaatagatttaggtttacatataaatgtcgtaacattaacagcaaaggataaaatatgc
tttcaagaagaaatgaactgttcgaaggagcattgccctttttcagaggggtattatgat
agaataaatgaggcagttttagatattttaaccaatgaaaagttaattacacgaacaata
atagaagcatacgctcgaaaacattccgtttgtccctttgaatattcactggatgtagcc
tattctgccgatgtggtcatttgtgattataattatatattcgatccgaaagtttcctta
aaaagactgtgggatgaacagaagaaaaaaacggttttacttattgatgaagctcataat
ttagtggatagaggccgcgagatgttttcctctagtataaacaaagctagttttcttcaa
ataaaaagagattacactaagatgaatgacacactctcgaaagcagcgaaattagtaaac
gattatttattgtcggtaaaaaagaaggaaacatttcaaataaaagaattagatgaagaa
gttgttcagctgttagaaacgtttatcgaggaagcggaaatggtgttaattcaacaaagt
gacgggaatgaaatactgttagaaacctatttcgctgctcaatcgtttgtgaaaatttcg
aagctttatgatgaacggtttgttacgtatgtagaagtaaataaaagtgaagtgacgatg
aagctgttttgtttagatccatccgaacttctacaaaaaacgagaaaaagcttccgttcc
actattttcttttctgctaccttatcaccaacagactattaccaaaacttattaggtgga
aggtcggaagattacgttatgagcatcccttccccatttccacgggaaaatgcagaaata
attatacagccactatctacaaagtaccacgatcgagagcgaacgatgggtccgatgata
cagtttatgttagagatattatctaatagggccggcaattttttagttttcttcccttca
tatgcgtatatgagggcagtttatgaacagtttatagtaacagctcctgatgttcctact
attatacaagatgtaggtatgtccgaaagtgaacgagaaaggttcctcgaatcgttccaa
gcggataatgtagaacgattagtaggctttgctgttttaggtgggattttttctgaagga
gtagatttagtaggagaacggcttcaaggcgtgatcatcgtgggcgttggcctgccacaa
atcggtgtagaacgggacattattaaagattatttccagttcatcgggaaaaatggattt
gactacgcctacgtataccctggtatgaacaaagtacttcaagccggtggaaggctcatt
cgttccgattctgatactggaactatccttttaatagatgatcggtttttgcagcgaaaa
tatcaatcattactccctttggagtggcagcattatacagtgcgacggacgtga
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integrated database retrieval system
