Sutcliffiella cohnii: BC6307_11340
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Entry
BC6307_11340 CDS
T06787
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bcoh
Sutcliffiella cohnii
Pathway
bcoh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcoh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BC6307_11340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoh03019
]
BC6307_11340
03400 DNA repair and recombination proteins [BR:
bcoh03400
]
BC6307_11340
Enzymes [BR:
bcoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BC6307_11340
Messenger RNA biogenesis [BR:
bcoh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BC6307_11340
DNA repair and recombination proteins [BR:
bcoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BC6307_11340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AST91829
UniProt:
A0A223KQS0
LinkDB
All DBs
Position
2299096..2301222
Genome browser
AA seq
708 aa
AA seq
DB search
MIEAKNILQKYYGYSDFREGQKSIIENILSGHPTLGIMPTGGGKSICYQIPALLMDGVTI
VISPLISLMKDQVDSLTSIGIAATYINSSISNEEIEERLYKVLKEEFKIIYIAPERLHTS
QIASYFNKVNVSFIAVDEAHCLSQWGHDFRPSYRKIGSFIQQLQNKPLIAAFTATATEEV
SEDIREVLRIEEKDTFITGFSRENLFFNVERGTDKEKYISKYLQANKEVSGIIYAATRKE
VDSLTEKIATWGYSVSKYHGGMGEEERKVSQDKFLFDEVDVMVATNAFGMGIDKSNVRYV
IHYNMPRTIESYYQEAGRAGRDGLKSECTILFNARDIQLQKFLIEQSLLNSERKSVEYQK
LQAMVDYCFTTRCHQTYITEYFGESNTNDCGRCSNCSGDYEERDITIEAQKIFSCIKRMN
ERFGMTMVAKVLKGSKEKKLQQFNFHTLKTYGIMSNYTEKQIVELMNILSAEGYLFLTEG
QFPVVKLGRRSTGVLTNGEKVLLKIKKQTTSVATDDALFEKLRQLRRLIAQERNVPPYVV
FSDSTLLDISRELPTSKERMLAIKGVGEHKWEQFGEQFIKAIQEYIENNGGARKVPTGNA
TVINENVSTEPSHLVTISMFNNGSTLSEIAKQRNMSIFTIQNHFLKCDKEGIEVNWNYFI
PEEYEELIVTTIKEIGTEKLKPIKEALPEEVDYMAIKATIAKHRLEVV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
ttgattgaagcgaaaaatatactacaaaaatattacggttattctgattttagagaaggg
caaaaaagtattattgaaaatatattaagtggtcatccaactttaggtattatgcctact
ggtggaggaaagtctatctgctatcaaataccagcattactaatggatggtgtaacaatt
gtcatatcaccattaatatctttaatgaaagaccaagttgattcgctaactagcatagga
atagctgcaacctatattaatagttctatttcaaatgaagaaatagaagaaagactttat
aaagtcttaaaggaagaatttaaaattatttatattgctcctgagagattacatacttcc
cagattgctagttattttaataaagtaaatgtttcttttatagcagtggatgaggctcac
tgtctttctcaatggggccatgattttcgtccaagctatcgaaaaataggtagttttatt
cagcaattacaaaataagcctttaatcgcagcatttactgccactgcaacagaagaagtg
tctgaagacattagggaagtattacgtatagaagagaaagatacttttataactggattc
agtagagaaaacttattttttaatgttgaacgaggcactgataaagaaaaatatatatca
aaatacttgcaggcaaataaagaagtttccgggattatttatgctgcaacaagaaaagaa
gtagacagcttaacagaaaaaattgcaacatggggatattctgtttcaaaataccatggc
gggatgggagaagaagaacgaaaggtatcacaggataagtttctttttgatgaagttgat
gtcatggtggctacaaatgcatttggaatggggatcgataagtccaacgttcggtacgtg
attcattataatatgccaagaacgatagaatcctactaccaagaggctggtagagctggt
agggacggtttaaagagtgagtgtaccattttgtttaatgcacgagacattcaattacaa
aaatttttgattgaacaaagcttactaaacagcgagcggaaatctgtggaatatcaaaaa
ctacaagctatggtagattattgtttcactacccgctgtcatcaaacatatataacagaa
tatttcggtgaaagtaatactaatgactgtggaagatgcagtaattgttctggggattat
gaagagcgtgatattacgatcgaggcccaaaaaatattttcttgtatcaaaaggatgaat
gagcgttttgggatgacgatggtcgcaaaagtcttaaaaggttcaaaggaaaaaaagtta
caacaatttaactttcatacattaaaaacttatggaattatgagtaactatacagaaaaa
caaatagtagaattaatgaatatattaagtgccgaaggatatttatttttaacagaaggg
cagtttccagttgtaaaattagggagacgctctacaggggtattaacgaatggagagaaa
gtgttgttaaagattaaaaaacaaacgactagtgttgctacagatgacgctctctttgaa
aaacttcgtcagttaagaagattaattgcacaagaaagaaacgtcccaccatatgttgta
ttttctgattccacactattagatataagtagagagctacctacgagtaaggagcgcatg
ttagcaattaaaggcgttggtgaacataaatgggaacaatttggtgaacaatttattaaa
gcgatacaagaatatatagagaataacggtggggctaggaaagttcctacaggtaatgca
actgtaataaatgagaatgtatcaaccgaacctagtcatctcgttaccatttctatgttt
aataatggttccactctttcggagattgcgaaacaacggaacatgagtatctttaccatt
caaaatcattttttaaaatgcgataaagaagggatagaagtaaattggaattactttatt
ccggaggagtacgaagaacttatcgttacaactattaaagagattggtacagaaaaatta
aagcctattaaagaagctctacctgaagaagttgactatatggccattaaagcaaccatt
gcgaagcatcgcttggaagtagtataa
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