Sutcliffiella cohnii: BC6307_16775
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Entry
BC6307_16775 CDS
T06787
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bcoh
Sutcliffiella cohnii
Pathway
bcoh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BC6307_16775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcoh03400
]
BC6307_16775
Enzymes [BR:
bcoh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BC6307_16775
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BC6307_16775
DNA repair and recombination proteins [BR:
bcoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BC6307_16775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_Ribbon_TF
DUF7573
Auto_anti-p27
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AST92823
UniProt:
A0A223KU27
LinkDB
All DBs
Position
complement(3347935..3348762)
Genome browser
AA seq
275 aa
AA seq
DB search
MPELPEVETVRRTLVQLVKGKTIAEVEVRWPKMIKEPDDVQQFELLLRGQTILDIGRRGK
FLLFTLSDYVMVSHLRMEGRYGLFAKEEPMNKHVHVIFRFTDGTELRYQDVRKFGTYHLF
KPGEELKTKPLVNLGPEPFDESFTVDVLKQKLQRTNRNIKAALLDQSVVVGLGNIYVDEA
LFRSNIHPETIASSLTDEQIRTLHREIILTLQDAVEKGGSTVRSYVNSQGEIGLFQLDIF
VYGRNDEPCKKCGTVIEKSVVAGRGTHICPNCQRK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
ttgccagaattaccagaagtagaaacggttagaagaacgctcgtacaactagtaaaaggg
aaaacgatagcagaggtggaagttcgttggccaaaaatgattaaagagccagatgatgtc
caacaatttgagctattgcttcgtggccaaacaattttagatataggtagaagaggtaag
tttttactctttacgttatccgattatgtcatggtttcccatttaagaatggaaggtcga
tacggtctctttgcaaaggaagaaccgatgaataaacatgtacatgttatttttcgattt
acagacggaacagaattacgatatcaagatgtacggaagtttggaacgtaccatctgttt
aaaccgggtgaagaattaaaaacaaaaccgttagtaaaccttggcccagaaccgtttgat
gagagcttcacagtagatgtcttaaaacagaaactacaacgaacaaatcgtaacattaaa
gcagccctattagatcaatctgtagtagttggattaggcaacatttacgtcgatgaggcg
ttgtttcgttctaatattcatccagaaacaattgcaagtagtttaacggatgaacaaata
aggacactgcaccgagaaataattttaacgttacaagatgcagtggaaaaaggcggtagt
acggtacgttcttacgtaaattctcaaggagaaatagggttatttcaattagatattttt
gtgtacggtcgtaatgatgagccgtgtaaaaagtgtggaacggttatcgaaaagtccgta
gttgcgggtagagggacacatatatgtccaaattgtcaaagaaagtag
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