Sutcliffiella cohnii: BC6307_22130
Help
Entry
BC6307_22130 CDS
T06787
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bcoh
Sutcliffiella cohnii
Pathway
bcoh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcoh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BC6307_22130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoh03021
]
BC6307_22130
03019 Messenger RNA biogenesis [BR:
bcoh03019
]
BC6307_22130
Transcription machinery [BR:
bcoh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BC6307_22130
Messenger RNA biogenesis [BR:
bcoh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BC6307_22130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
ATPase_2
AAA
AAA_22
AAA_25
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AST93776
UniProt:
A0A223KWE0
LinkDB
All DBs
Position
complement(4412378..4413646)
Genome browser
AA seq
422 aa
AA seq
DB search
MELTISNLENLKLKDLYELARQYKISYYSKLTKKELIFAILKAQAEQDGLLFMEGVLEII
QSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVEAV
NGDDPESAKERVHFPALTPLYPDRHILLETQPRALSTRIMDIMAPVGFGQRGLIVAPPKA
GKTMLLKEIANSITTNHPEAELIVLLIDERPEEVTDIERSVAADVVSSTFDEVPENHIKV
AELVLERAMRLVEHKRDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIRR
SGTRKEELLIPKDHLDKLWAIRKTMSDSPDFAEKLLRRLRQTKSNEEFFSILDDEQKTGG
RR
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggaattaactatttctaatttagaaaatcttaagctgaaagacctgtacgaacttgca
cgtcaatataaaatttcgtattacagtaaattaacgaaaaaagaacttatatttgctatt
ttaaaagctcaagcagaacaagatgggctattgttcatggaaggtgttcttgaaattatt
cagtcggaaggattcggtttcttacgaccaattaactactctccaagctctgaagacatt
tacatttctgcatcgcaaattcgccgtttcgatttaagaaatggagataaagtatctgga
aaagttcgtccacctaaagaaaacgaacgttattacgggctacttcatgtagaagctgta
aacggcgacgacccagaatcagcgaaagaacgtgtacacttcccggctttaacgccatta
tacccagatcgtcacatcttacttgaaacacaaccacgtgcattatcgacaagaataatg
gacatcatggcaccagtaggttttggccaacgtggtttaattgttgcgcctccaaaagct
ggtaaaacaatgttgttaaaagaaattgcaaatagcattacaacgaatcatccagaagca
gaattaatcgtcctattaattgacgagcgtccggaagaggtaacagatatcgaacgttct
gttgcagctgatgtagtaagctctacttttgatgaagtgccagaaaaccatattaaagtt
gcagaactagtactagaacgtgcaatgcgtttagtagagcataagcgtgatgttattatt
ttaatggacagtattactcgtctggcgcgtgcttacaacttagtaattccgccaagcggt
cgtacgttatcaggtggtatcgacccagctgccttccaccgtccaaaacgattttttgga
gcagcacgtaacattgaagaaggcggtagcttaacaattctagcaacagcgttagtagac
acaggttctcgtatggacgatgttatttatgaagaatttaaaggtacaggtaatatggaa
ttacacttagaccgttcacttgctgagcgtcgtatcttccctgcaattgacattcgtcgt
tcaggtactcgtaaagaagagttattaattccgaaagaccatttagacaagctatgggca
atccgtaaaacaatgtctgattcccctgactttgcggaaaaactacttcgtcgcttacga
caaacgaaatcgaacgaagaatttttctctattctagacgatgagcaaaaaacaggtggt
agacgttaa
DBGET
integrated database retrieval system
