Sutcliffiella cohnii: BC6307_24145
Help
Entry
BC6307_24145 CDS
T06787
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bcoh
Sutcliffiella cohnii
Pathway
bcoh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcoh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BC6307_24145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoh03019
]
BC6307_24145
03009 Ribosome biogenesis [BR:
bcoh03009
]
BC6307_24145
Enzymes [BR:
bcoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BC6307_24145
Messenger RNA biogenesis [BR:
bcoh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BC6307_24145
Ribosome biogenesis [BR:
bcoh03009
]
Prokaryotic type
rRNA helicases
BC6307_24145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AST94121
UniProt:
A0A223KXD4
LinkDB
All DBs
Position
4807618..4809126
Genome browser
AA seq
502 aa
AA seq
DB search
MNRLICIDRSRNNLALFKDLGLSEQLMKSVERMGFEEATPIQGETIPIALQGKDVIGQAQ
TGTGKTIAFGLPLIEKIDVNDNNIQGIVIAPTRELAIQVAEELYKASYHKRARVLSVFGG
QDINRQIRSLKKFPHIVVGTPGRVLDHINRKTIRLQNVHTVVLDEADEMLNMGFIEDIEK
ILAQVPAEHQTLLFSATMPPQIRAIAERFMTEPVNVKVKAKEVTMPNIQQYYIETHEKKK
FDVLTRLLDIQSPELAIVFGRTKRRVDELAEALNVRGYAAEGIHGDLTQAKRMSVLRKFK
EGTVEVLVATDVAARGLDISGVTHVYNFDLPQDPESYVHRIGRTGRAGKSGLAISFATPR
EMSYLNHVEKVTKRKMEKMKAPTLDEALEGKQKVSMEKLTAAIEGDNLNYYRNAAEQLLE
EHDSVSIICAALKVLTNEPDQTPVKLTEESPVYRKDSRDNRSRGGSGGKGKNNNWSKRPS
NNKPSGNKRQGGGYKRSRKERV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaatagattaatttgtatagataggagtaggaataatttggctttatttaaagattta
ggtttatcagaacaattgatgaaatcagttgaaagaatggggtttgaggaagcaactcca
attcaaggtgaaacaattccgattgcgcttcaaggaaaagatgtaataggtcaagcgcaa
acaggaacaggtaagacgattgcgttcggtttaccgttaattgagaaaattgatgttaat
gacaacaacattcaagggatcgttatcgctccaactagagaattagcaattcaagttgca
gaagaattatataaagcgagctaccataagcgagctcgtgttttatcggtatttggagga
caagatattaatcgccaaatccgttctttaaagaaattcccacatattgttgtcggaact
ccaggtcgtgttttagaccatattaatagaaaaacaatccgtttacaaaatgtgcataca
gttgtacttgatgaagcagatgaaatgttaaacatgggctttattgaggatattgagaaa
attttagcgcaagttcctgccgagcaccaaacacttcttttctcagcaacaatgcctccg
caaattagagcaatcgctgaacgctttatgactgaaccggtaaatgtaaaagttaaagcg
aaagaagtaacaatgcctaatatccaacaatattacattgaaactcatgagaagaagaag
tttgatgtgttaactcgtcttttagatattcaatcacctgaattagcgattgttttcggt
cgtacaaaacgtcgtgttgacgaattagcggaagcgttaaatgtacgtggatatgcagca
gaaggtattcatggagatttaacccaagcgaaacgtatgagtgtacttcgtaaatttaaa
gaaggtactgttgaagttcttgttgcgacagacgttgcagcgcgtggtctagatatttct
ggcgtaacacacgtatataatttcgacctaccacaagatcctgaaagctatgttcacaga
attggtcgtactggccgtgcaggaaaaagtggtctagcaatttcattcgcaacgcctcgc
gaaatgagttacttaaaccatgtagaaaaagtaacgaagcgtaaaatggaaaaaatgaaa
gctcctactcttgatgaagcattagaaggtaagcaaaaagtttccatggagaagttaaca
gctgcgattgaaggggataaccttaactactatcgtaatgctgcagaacaacttcttgaa
gagcatgattctgtatcaataatttgtgcagcattaaaggtattaacgaatgaaccagat
caaactccggttaaattaacggaagaatcaccggtttaccgtaaagactctagggataac
cgttctcgtggcggaagcggtggaaaaggtaaaaacaataattggtctaaacgtccaagt
aacaataaaccttcaggtaacaaacgtcaaggtggcggctataaacgctctcgtaaagag
cgcgtctaa
DBGET
integrated database retrieval system
