Borrelia coriaceae: bcCo53_000501
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Entry
bcCo53_000501 CDS
T08173
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bcoi
Borrelia coriaceae
Pathway
bcoi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcoi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
bcCo53_000501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoi03021
]
bcCo53_000501
03400 DNA repair and recombination proteins [BR:
bcoi03400
]
bcCo53_000501
Enzymes [BR:
bcoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
bcCo53_000501
Transcription machinery [BR:
bcoi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
bcCo53_000501
DNA repair and recombination proteins [BR:
bcoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
bcCo53_000501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
CT0912-like_C
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UPA16360
LinkDB
All DBs
Position
511046..512077
Genome browser
AA seq
343 aa
AA seq
DB search
MSLGKLLKDFTIPDRIEFLREEDDSSYGKFVMYPFEKGFGVTIGNTLRRVLLSSIEGYAV
SAMRIQSNQGGSLKIVSSEFDLIPGVVEDTLEVIANIKNIHLKLDEGVDSTTISLSVNGK
DTSVLKASHFEREGIEVFNKDLVIATLSSEADLDFEFQINYGRGYVSSEQNARYLEEVNT
IALDSIFSPIEKVTYSVEDTRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIVRDFLLP
LVNFEDKVVCSVEGSEFKDSDVLSINIEKLNLSVRSLNCLTKENVKTLGELISKSAEELS
KARNFGKKSLEEIVEKLSAYGLFLGMSKSEALKILNKNDKISH
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaggaaagcttttgaaagattttactatacctgataggattgaatttttaaga
gaagaggatgatagctcttatggaaaatttgtcatgtatccttttgaaaaaggttttggt
gttactattggaaacactttaaggcgggttttactgtcttctattgaagggtatgctgtt
tctgctatgagaattcagtctaatcaaggtggatctttaaagatcgtttcaagtgaattt
gatttaatacctggtgttgtagaggatactcttgaggtaattgctaatattaagaatatt
catttaaagttagatgagggagttgatagtacaacaataagtctttctgttaatgggaaa
gatactagtgttttaaaagcatcgcattttgaaagagagggtattgaggtttttaataaa
gatttagtcattgctacactttcaagtgaggcagatttggattttgaatttcaaattaat
tatggaagagggtatgtttcttctgaacagaatgctaggtatttagaagaagttaatacc
attgcacttgattctatattttccccaatagaaaaggtaacatattctgttgaggatact
cgggttggacagagatccgattatgataagcttgttatggaaatttggacaacaggtgta
attagtgctaaggatgcaattaaaaaggcggcttctatagtgagggactttttacttcca
ttggttaattttgaagataaggttgtgtgttctgttgagggttctgagtttaaggattct
gatgtacttagtataaatattgaaaaattaaatttgtctgtaaggtcccttaattgttta
actaaggaaaatgttaaaactttaggagaactgattagtaaaagtgcagaagaactttca
aaagcaaggaattttgggaaaaaaagtttagaagaaatagttgaaaaacttagtgcttat
ggattatttttggggatgtctaaatcagaagctctcaaaatattgaataaaaacgataaa
atatctcattag
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