Baudoinia panamericana: BAUCODRAFT_110911
Help
Entry
BAUCODRAFT_110911 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
bcom
Baudoinia panamericana
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcom03009
]
BAUCODRAFT_110911
Ribosome biogenesis [BR:
bcom03009
]
Eukaryotic type
90S particles
Other 90S particles
BAUCODRAFT_110911
Pre-60S particles
Other pre-60S particles
BAUCODRAFT_110911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
19107179
NCBI-ProteinID:
XP_007677890
JGI:
Bauco1_110911
UniProt:
M2N8J5
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MSLQERLDKIRSSPKLQNQQQTAVVLSAIEDTLRTSDSEPTPTGYFAALLSLLKQYISTE
KGIVNKEVAYAVIYLLDLVTSHVPAPLLRSKFSQILASLAPALTLSDAEAPLLRASIGCL
ESLLVAQDAQAWALPQSQSSPRGAVGGLLALAMDPRPKVRKRAHEALDRVLRNPPPSPSL
DHPAADMCAETALRNLQVAADEASTKKRKHRHKDDQQHEPGLMHALQLVKAIAAAENGWP
SKKIDALCELLLNISRGSNEFLTMAAFEVFEIIFAGLADEVSSAKLPRVLAAITELQPSQ
NDSQLLPPWIAVLSRGHDVSAQVEPQETFEKLPDLFVLISSFLASSSHNIRISASECLIS
LLHTCVPDSVLLDPSVMDDKVLERIGKTLRDLLSVKYQTAWIEVFNVQTAAFEVLRWRSS
PLLDGIVQAVGDLRSNDAFAGKLEADAVLSAAIRAMGPDNVLSILPLNLDRSVNSQPGRA
WLLPLVRDATSNARLAHFRSELVPLSETMFQRVLNHGSAEKTMEIKIFETVVAQIWACLP
GYCELPLDLRNSFDQDFAEMLSNLLYQQPQLRTDVCKGLQSLVDTNKAIAELEDDHDNLI
KQGRITKAEAKLNIQHLAGFAGNLLAVLFNVYSQTLPHNRGNLLQCINAYLSITPEKELL
ETFERVATMLEGSLTESTTDGSADKKQQPSSEEAKSKMPPMSHTLMDLVITMSIYLPRQS
FAGLFNMAANIVNKQDDAQLQKKAYKLIPRLAESEIGKQALGERSVELQQLVLTAADKAL
APARRDRLASIAQVVPFLPKDDLHFIPAVLSEVVISAKEVNEKARTAAFDLLVLMGEKMS
EGGTVVNAKVPNMPADAPPAQASLEEYFTMVSAGLAGSTPHMISASITALTRLLYEFRSK
LKPETVSDLVQTMDLFLTSKNREIVRSVLGFVKVCIISLPTELVVQRLPTLIPNLLVWSH
EHKAHFKAKVKHIFERMIRRFGIEVVEKYTPEADRKLISNIRKSRDRKKKRKDGAGEEDD
DDDVSGRRKGRFESEYDQAVYGSDEEEGAESEDISDDEVLGRAAEKGKKAGQKGGRQYIV
EEEDEPLDLLDRRALGHVSSTKPTKPRMANGVKRKADVDLDGKLVFNEEASDDDVMEFED
KGMLNGSEPGDGSLEGGINAYVAALKGKDAPRRGEKGKLKFSNKRDADGGGDEEMDVDEQ
EVAAAVRAHAKPRADRGGRGGGKQRPMRRGLGAEKMSGGQGGGGGGIRKARGKPGAFRHG
LQSRRGKGTKR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcaagagcgtctcgacaagatccgctcctcgcccaagttgcaaaaccagcaa
caaacggccgtggtactgagcgcaatcgaagatacgcttcgaacttcagacagcgagcct
acgccgactggttatttcgccgcactgttgagtctgctgaaacagtacatctcgaccgag
aagggaatcgtcaacaaggaagtcgcttatgcggtcatctacctgctggatctcgtgacg
agccatgtaccagcgccgctgctacgctcgaagttctcgcagatactggctagccttgcg
ccggctttgacactctcggatgctgaggcacctttactaagagcgagcattggctgccta
gagtctctgctggtcgctcaagatgcgcaggcatgggcgcttccgcagtcgcagagcagt
ccaagaggtgcggttggcgggttgttggccctggctatggaccctcgaccgaaggttcgc
aagagggcgcacgaagctttggacagagtcctaaggaatccccctccgagcccttcactc
gaccatccagccgcggatatgtgcgccgagactgcacttcgaaacctgcaggttgcggcg
gatgaggcgagcaccaagaagcggaagcacaggcacaaggacgaccaacagcatgagccg
ggtctgatgcatgcactgcaacttgtgaaagcaatagcggctgcggagaacgggtggcca
agcaaaaagattgatgctctatgcgagctgctgctcaatatctcacgaggcagtaacgag
ttcttgaccatggccgcatttgaggtgtttgagatcatcttcgccggtttagcggatgag
gtgtcgtctgccaaacttcctcgggtgctggctgcgattacagagctccaaccgtcgcaa
aatgactcgcagctgcttccgccatggatcgccgtgctcagtcgtggccacgacgtctct
gcgcaagtggagccgcaagagacgtttgagaagttgcccgacctgttcgtgttgatctcc
tctttcctcgcttcttcttcacacaatattcgcatatcggcgtcagaatgcctgatctcc
ttgctgcacacctgcgttccagactcggtgctcctcgacccatccgtcatggacgacaaa
gtactagaaaggatcggcaagactctgcgcgacttgttgagcgtcaagtatcagaccgct
tggatcgaggtctttaacgtccaaactgcagcctttgaagtactacgctggcgctcctct
ccgctgctggatgggatcgtgcaagctgtgggcgatctccgtagcaatgatgcattcgca
ggcaagctggaagcggacgctgtgctttcggcagccattcgtgcgatgggtccggacaac
gttctatccatcctgccgctgaatctcgacagatcggtaaactcccagccaggccgagcg
tggctactgcccctagtgcgtgacgccaccagcaatgcacgccttgcgcacttccgctcg
gagctagtgccgctcagcgagacgatgtttcaacgagtcctcaaccatggcagcgcggag
aagacgatggagatcaagatattcgagacggtggtggcgcagatatgggcttgtctgcct
ggatactgcgaactgccgcttgatcttcgcaacagcttcgatcaggatttcgcagagatg
ctgagcaacttgctgtatcagcagccgcaactgcggacggacgtgtgcaaaggtttgcaa
agccttgtagacacgaacaaagctattgccgagcttgaagacgaccatgacaatcttata
aagcagggcaggatcacgaaggcggaggctaaattgaacatacagcatctcgcaggcttt
gcgggcaatctactcgctgtattgttcaacgtctacagccagacgcttccgcacaaccgg
ggtaacctactgcaatgcatcaatgcttacctcagcatcacgcccgagaaggaattgttg
gagacttttgagcgcgtggcgacgatgctagaaggttcacttaccgaaagcaccactgac
ggatccgccgacaagaaacagcagccttcgagcgaagaggcaaagagcaagatgccgccg
atgtcgcatacactgatggaccttgttatcaccatgtctatctacctcccccgccaaagc
ttcgctggcttgttcaatatggctgcaaacattgttaacaaacaggacgacgctcagctg
cagaagaaggcatataagctcatcccacgccttgccgagtcggagatcggcaagcaggca
ctcggagagcgtagtgtcgagctccagcagcttgttctcaccgcagctgataaagcctta
gcgcctgcaagacgagacagactggcaagtatcgcacaagtagtgcctttcttaccaaag
gacgacctgcatttcatacctgctgtcttgtcggaagttgtcatcagtgccaaagaagtc
aacgaaaaggcccggacggctgccttcgaccttttggtcctgatgggtgagaagatgagc
gaaggcggcacagtggtgaacgcgaaagttcccaatatgcccgcggacgccccaccagca
caagcgagcctcgaagagtacttcacgatggtatctgccggcctagcaggttcgactcca
cacatgatctccgcttccatcacagcgctcacgcggctgttgtatgaatttcgcagtaag
ctgaagcccgagaccgtgagcgatctggtgcagacgatggatctgttcctgacaagcaaa
aatcgtgaaatcgtgcgtagtgtgctcggctttgtcaaggtttgcattatcagcctgccg
actgagcttgtggttcagagactgccgacactgatccccaatctgcttgtgtggagtcac
gaacacaaagcacatttcaaggcgaaggtgaagcatattttcgagcgtatgattaggcgg
tttggtattgaggttgtggagaagtatactcctgaagcggatcggaagctgatcagtaat
atccggaagagccgtgatcggaagaagaagagaaaggacggtgcgggagaggaggacgac
gatgacgacgtatctggaaggaggaagggcaggttcgagagtgagtacgatcaagcggtg
tacggctccgatgaggaagagggagcggaaagcgaggacatctccgatgacgaggtgttg
ggacgggctgcagagaagggcaagaaagctggtcagaagggcgggcggcagtacattgtc
gaagaagaggatgagccgctggacctattggatcggagagcgctggggcatgtgtcgtcc
actaagcctacgaagccacgaatggcgaacggagtgaagaggaaggcggacgtggacttg
gacggcaagcttgtcttcaacgaggaagcatccgatgacgatgttatggagtttgaggac
aagggcatgctgaatggtagtgagcctggcgatggttcgctagaaggcgggatcaatgcg
tatgttgccgcgttgaagggaaaagatgcgccgaggcgaggcgaaaagggcaagctgaag
tttagtaataagcgtgatgctgatggtggcggcgatgaggaaatggacgtggatgagcag
gaagtggcggctgcggtcagggcgcatgctaaaccgcgagcggatcgtggtgggaggggt
ggagggaagcagaggcccatgcgccgcggtttgggtgcggagaagatgagtggcggtcaa
ggtggcggcggaggtgggattaggaaggcgagagggaagcctggcgctttcaggcacggg
ttgcagagtcggagagggaagggcacgaagcggtag
DBGET
integrated database retrieval system
