Baudoinia panamericana: BAUCODRAFT_120082
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Entry
BAUCODRAFT_120082 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
bcom
Baudoinia panamericana
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcom03009
]
BAUCODRAFT_120082
Enzymes [BR:
bcom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BAUCODRAFT_120082
Ribosome biogenesis [BR:
bcom03009
]
Eukaryotic type
90S particles
Helicases
BAUCODRAFT_120082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
19107478
NCBI-ProteinID:
XP_007673931
JGI:
Bauco1_120082
UniProt:
M2LVU0
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MDPLKLLSRATKPSKSRLPAGLSNSPSQGAQASKDVNPRKRKRGEGVTDGSNDNVFGLEF
FHHNAAGASQPFRNASRQSKVSQDGSEGLAAKPETALSAELPNSTTLDGEAKAVLNRHKV
KITWLNPGVLSQKDSRNCSAKRKPAKPALYPHPLHSIGDLQPRFDISRKLASNLDEQGYV
APTEVQLATLPLLLDRTDSFLPRSLDATESGPYGLDMLTVAPTGSGKTLAFLVPLVHKAR
HQRRTKVVGDNGQAKAIILAPTKELVSQIVNEGRKLTQGTGVRVVQLRKGMRLIARNDSD
RGTVAAAADAPSSGVRTIVRADILVSTPGLLHAMLRDDEISSADLVNVSSLILDEADVLL
DPLFREQTLSTWDNLNNPELRVSLWSATMGSNIEELTRSTLERRLKRLREQHGLQVEEAP
LIRVVVGLKDSAVSNVQHRLVYAATEQGKLMALRQLLHPTSTSKDIGPSLLPPFLVFTQT
IERAIALHSELLYDIPAEAGGISRIAVLHADLSDTARDSVMTRFRKGEIWVLITTDLLSR
GVDFRGVNGVVNYDIPTSSAAYVHRVGRTGRAGRVGGVAVTLYSREDMPYMKHVANVVAI
AQKQQVRADGGVDNQQWLLDTLPKLSKQEKEKFKKGGIESRTARGKDADPKSARRARISS
KSGYVRRAENNRRSAIIGNRQRAPLTVDGGDEIDFVGFD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggatccgctgaagcttttatcgagggcgacgaagccgtcgaaaagcagattgccagca
gggttgtcgaattctccctcacagggtgcgcaggcttctaaggacgtcaacccgagaaaa
cgcaaacgtggcgaaggcgttaccgacggaagcaatgataatgtgttcggtcttgagttc
ttccatcacaatgcagccggtgcttcgcaaccattccggaacgcgtcacgtcaatccaag
gtttcgcaagacggaagcgaaggcctagcagcgaaacccgagacggcgctatcagctgaa
ttgcccaactcgacaactctcgacggagaagccaaagctgtactcaatcggcacaaagtc
aagatcacgtggctgaacccgggcgtactttctcagaaggacagtcgaaactgcagcgcg
aagcgaaagcctgctaagccagctttgtatccacatcctctgcactcaattggtgacttg
cagcctcgcttcgatatatccagaaaactcgcatccaaccttgatgagcagggttatgtc
gcgccaacagaggtgcagctcgcaaccctgccgctcctgcttgaccggacagactccttc
ttaccaagatccctggacgccacagaatccggaccgtacggccttgatatgcttacagta
gcgcccaccggtagcggcaagacgctggcatttctcgtaccactggtacacaaagctcgc
catcagcggcgaaccaaggtggtaggcgacaacggccaagccaaggcgattatactagca
cccaccaaggagcttgtgtcccagattgtgaacgagggacgcaagcttacgcaaggtaca
ggagtcagggttgttcagctgcgcaaaggtatgcgtctaattgcgcgtaacgacagtgac
cgtgggactgtcgccgctgccgcggatgcgccaagttcaggggtccgcacaattgtgagg
gcagatatactagttagcacgcccggtttgctacacgctatgctccgcgacgatgaaata
tcatcggcggacttagtcaatgttagcagtctgatactggacgaggcagatgttcttctc
gatcctctgtttcgcgaacagaccctttctacatgggacaatctcaacaatccggagctg
agagtaagcctctggtccgcgaccatgggaagcaacattgaggagctcacaaggtcaacg
ctcgaacgacggctgaaacggctgcgggagcagcacggcttgcaggtggaagaagcaccc
ttgatccgagtggtagttggtctcaaggactcagctgtgtcaaacgtgcagcaccggctc
gtgtatgcagccacagagcaaggtaagctcatggctttgcgtcaactcctacacccaact
tcaacatcaaaagacattggtccatcactcttaccgccgtttctggttttcacgcaaacc
atagagcgtgccatcgccctgcactccgagttgctgtacgacatacctgcagaagccggc
ggcatcagccgcatcgctgtattgcatgcggatctctccgacactgctcgagacagtgtc
atgacgcgcttccggaaaggcgaaatctgggttctgatcactactgacctgctctctcgt
ggcgttgactttcgcggcgtcaacggtgtcgtgaactacgatataccaacttcaagcgcg
gcctacgttcaccgtgttggtcgtaccggacgtgctgggcgggtaggtggggtggctgta
actctatacagcagggaagacatgccgtacatgaagcatgtagcgaacgttgtcgctata
gcccaaaagcagcaagtcagagcggatggcggcgttgacaatcagcagtggttgctcgat
acgcttcccaagctcagcaagcaagagaaggagaagttcaagaagggtggcatcgagtcg
agaacggcgcgtggcaaggacgctgacccgaagagtgctcgaagggcgcgcatcagctcg
aaatcgggctacgtgcggcgcgcggagaacaatcggcggagcgccatcattggtaacagg
caaagagcgccgctcaccgttgacggtggtgacgagatcgacttcgtggggtttgactga
DBGET
integrated database retrieval system
