Baudoinia panamericana: BAUCODRAFT_123936
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Entry
BAUCODRAFT_123936 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
bcom
Baudoinia panamericana
Pathway
bcom03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BAUCODRAFT_123936
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bcom01002
]
BAUCODRAFT_123936
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcom03021
]
BAUCODRAFT_123936
03036 Chromosome and associated proteins [BR:
bcom03036
]
BAUCODRAFT_123936
Peptidases and inhibitors [BR:
bcom01002
]
Metallo peptidases
Family M1
BAUCODRAFT_123936
Transcription machinery [BR:
bcom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
BAUCODRAFT_123936
Coactivators
SAGA/TFTC/STAGA complex
BAUCODRAFT_123936
Chromosome and associated proteins [BR:
bcom03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
BAUCODRAFT_123936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M1
Motif
Other DBs
NCBI-GeneID:
19107836
NCBI-ProteinID:
XP_007677943
JGI:
Bauco1_123936
UniProt:
M2MVB3
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MDGIQHTSVPEYSILKQRVDLDVDFARRSLKGSTEITVQPLVKDLRQLQLHCRQCTLTSV
QAGGITAKYEYEDPYRRLRMPAGSNVHQHEMLKEKVLHSLAPRLRPELLIALPPKLKIQE
LHVDAGSAAVTAARVSGTPNLERHETDADGVAIAETPILASAGQHHLPQFAPIKLFIEFE
VDNFRDGVHWIGSEEGDKRYPYMYTKASPLPGNTSCIFPCVDNATARCTWELSIRCPRTL
GDAFGKSSAMTVEPAEPLGVDGNARMENGVAEKHTAANTDPSMPQLSLDLSEEDAALELV
VACVGEQIDDVADAEDDTRHTVTFSLTDPVTARHIAFAVGPFERIDLSSVRDADDEERLG
QRAVKVDGFCLPGRGDQVRNTCYPATRIIDYFGVNYTSFPFSSYKILFADDMVHDTVAAA
GFTICSSHILLPADIIEPLEPTTRTIIRAVAEQWAGVSVIAKEPSDAWVVSGIAGYMSDL
YGKTLLGNNAYRWQQKLAAEKVYELDADRPSISQHGHYLHLDPSIREFLDLKSALVLFIL
DRRLLKASGTTGVQRIINKILVNATTGTLENGELSTVDFQRQCEKLGHNKLESFFRQWVF
GAGCPIFQVSQRFNKKKLVVEMTILQRQIERQTKPPFAPNNFMREIKEHVQEIWAPETLP
VFTGPMTIRIHEADGTPYEHIVEIKEQTTKLEIPYNTKYKRLKRSRRQKDRAMAESNNGE
GGEESLLYCLGDILDSPEECREWNLVDWTSEDEDRMGQESYEWIRMDADFEWIGKIHLTM
PLYMYVSQLQQDRDLVAQYDSMRYLTLANPHHVSFSILVRTLMDHRYFHGIRAMAADGLA
ILVARVDPQSSNADELRTIGQFHLMKAFEELFCFPGENMPRPNDWTNRANFIVQCAIPRS
MAKLRDGEGKVPLAIRRFFMDKLRFNDNSDNPFSDCHYVATLLTCLADSLVVSHREPQPT
YTFSFGEDEPMEPENPDEPLEAEGINAIERYRRIDEWETTYHNIYSLTALECLQKLTKAG
MAKDKTSEVLQYTRPANADLVRVAAFRCLVEIGVARKMSMMAYLLHCIADEPSPFVRGRL
LACFGEALGHIALGDSEPVQPRPQPAEADGLILEQAASSEARQFEVSRKTTPDGAIAALK
AALGNEDRFKRALWYATTSPDLTLDEVAAFCDIAALLYPAVASAKVTLKLPRLYRCKHLG
RGKMRFWQTGSVKTAPRKPLDSEDLQAIRMLVRRTSV
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggatggtatccagcacacgagtgtaccggagtatagcatcctaaaacagcgggtggat
ttggatgtcgactttgcgcgccgctcgctcaaaggcagcacggagatcacggtgcagccg
ctcgtgaaggatctacgacaactccagctgcactgccggcagtgtactctcacttccgtt
caggccggcggcatcaccgccaagtacgagtatgaggacccataccgtcgcctgcgcatg
ccggccggctccaacgtgcatcagcatgagatgctgaaggagaaggttctgcattcgctc
gcgcctagattgcggccagaactcctcattgcgctgccgccgaagctaaagatccaagag
ttgcacgtcgatgccggaagtgcggcggtcacagcggctcgcgtgagcggcacgccgaac
ctggagcggcacgagacagacgcggacggcgtggcaatcgcggagacaccgatactggca
tccgctggacagcatcacctcccgcagtttgcgccgatcaagctctttattgagtttgaa
gtagacaacttccgcgatggcgttcactggattggcagcgaagaaggcgacaagcggtac
ccgtacatgtacaccaaggccagcccgctaccaggcaacacaagctgcatctttccctgc
gtcgacaatgcgaccgcgagatgtacctgggagctgtcaatacgatgtccgcggacgctt
ggagatgctttcggaaagtcgtcagcgatgacagtcgagcctgcagaaccgcttggtgta
gatggcaacgctcgaatggaaaacggcgtggccgagaagcatactgcggcaaatacagac
ccttcgatgccgcagctctccctcgacctaagcgaagaggatgctgctttggagcttgtt
gttgcgtgcgtcggcgagcaaatcgacgacgtcgccgatgcagaagacgatacgcggcac
acggtcaccttcagcctcacagatccggtcactgctcgccacatcgccttcgctgttggc
ccgtttgagagaatcgacttgtccagcgtgcgggacgcggatgatgaagaaaggctcggt
cagcgcgcggttaaggtcgacggcttctgccttcctggtcggggggaccaagtgcggaac
acttgctatcccgccacacggatcatcgactacttcggcgtcaattacacctcgttcccg
ttctcaagctacaagatactgttcgcggatgacatggtccacgatacagttgcagcagct
ggcttcaccatttgcagctcccacattctccttccagccgacatcatcgagccacttgag
ccaaccacaaggaccatcatacgtgcggttgctgagcagtgggcaggggtcagcgtcatc
gccaaagaaccttccgatgcttgggttgtctccggaattgcgggctatatgtcggatctg
tatggtaagaccttgctcggcaacaacgcttaccgatggcaacagaagctcgctgcagag
aaggtgtacgagcttgatgctgatcgtccatccatatcccaacatggccactatctgcac
ctcgacccgtcaatccgcgagttcttagatctcaaatccgcgcttgtcctcttcatcctt
gacagaaggcttttgaaggcgagcggtaccacaggcgtacagcgcatcatcaacaagatc
ctggtcaacgccaccaccggcacactcgagaacggtgagctctcgacggtggacttccaa
cggcaatgcgagaagctcggccataacaagctcgagtcctttttccgtcagtgggtcttc
ggcgccggctgccccatcttccaagtgtcccaacgcttcaacaagaagaagcttgtggtc
gagatgacgatcctgcagcgccagattgaacggcagacgaagccgccgtttgcgccgaac
aatttcatgcgcgagatcaaagagcacgtgcaggagatctgggcgccagagacgctacct
gttttcaccggcccgatgacgatcaggatccatgaagcggatggtacgccgtacgagcat
atcgtagagatcaaggagcagaccacgaagcttgagataccgtacaacacaaagtacaag
cgcctcaagcgttcacggcgccagaaagaccgcgcaatggccgagagcaacaatggcgaa
ggcggcgaagagtcactgttgtactgtcttggtgacatcctggattcacccgaagaatgc
cgcgagtggaatcttgtggactggacctcagaagacgaagaccgcatgggtcaagagagt
tacgagtggatccgcatggatgccgacttcgaatggatcggtaagatccatcttaccatg
ccgttgtacatgtacgtctcgcagctgcagcaggatagggatctggtggcgcagtacgac
tccatgcgctatctcacactggcgaacccgcaccatgtctctttcagcatcctggtgcgc
acactgatggaccaccggtacttccatggcattcgtgcgatggctgccgacgggctggcg
attctggttgcaagagtcgatccgcagagcagtaatgccgacgagctgagaacgatagga
caatttcatctaatgaaggcttttgaagagctattttgctttccgggcgagaacatgcca
agaccgaatgactggactaatcgagccaacttcatcgtccagtgcgccattccacgctcc
atggcgaagttgagagatggagaaggcaaggtgccactcgctatacgccgcttcttcatg
gacaagctgcgcttcaacgataattcggacaatcctttctccgactgccactacgttgca
acactcctcacgtgtttggctgactctctcgtggtgtcacaccgtgagccacagcctaca
tacactttcagtttcggcgaagacgagccaatggagccggaaaaccctgacgagccgctc
gaggctgagggcatcaatgccatcgagcgctacagacggattgatgagtgggagacaacg
taccacaacatctactcgctcacggcgcttgagtgtttgcagaagctgaccaaggctggt
atggctaaagacaagacaagcgaagtactgcaatacacccgcccagccaacgcggacttg
gtgcgtgttgctgcgtttcggtgcttggttgagattggcgtagcgaggaagatgagcatg
atggcgtatttactccactgcattgctgacgagccctcgcccttcgttcgtggccgctta
ctcgcgtgcttcggcgaagctcttggccatattgctctcggcgactctgagccggttcag
cctcgaccacagcccgctgaggccgacggcttgatactggagcaagcagcgagcagcgaa
gcccgacagttcgaagtcagtcgcaagaccacacccgacggcgccatcgcggcgctgaaa
gcggcacttggcaacgaagacaggttcaagcgcgcgctttggtatgcaactacatctccg
gaccttactttggatgaggttgctgcattctgcgatattgcggcgcttctgtacccggcg
gtagcatcggcgaaggttaccctgaagctgcctaggttgtacaggtgtaagcacctcggc
aggggaaagatgcgtttctggcagactggaagtgttaaaaccgccccgaggaagccgctt
gacagcgaggatctgcaggcaatccgaatgctggtgaggaggacatcagtctga
DBGET
integrated database retrieval system