KEGG   Baudoinia panamericana: BAUCODRAFT_125443
Entry
BAUCODRAFT_125443 CDS       T03106                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
bcom  Baudoinia panamericana
Pathway
bcom03020  RNA polymerase
bcom03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bcom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BAUCODRAFT_125443
  09124 Replication and repair
   03420 Nucleotide excision repair
    BAUCODRAFT_125443
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bcom03021]
    BAUCODRAFT_125443
   03400 DNA repair and recombination proteins [BR:bcom03400]
    BAUCODRAFT_125443
Transcription machinery [BR:bcom03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     BAUCODRAFT_125443
DNA repair and recombination proteins [BR:bcom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      BAUCODRAFT_125443
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 19107968
NCBI-ProteinID: XP_007679677
JGI: Bauco1_125443
UniProt: M2MQ59
LinkDB
Position
Unknown
AA seq 161 aa
MAGPPTTQPHRPIPLSRRRPLPSGDEEATSFLKLGEFDNTPCLSVAECNELLTRLAEKSG
GGNTRPATQNNDVYLKTREYVESFARFKDSKTVTQVDAISSALLGRGKGEGVTNFERAQL
ATLCCDTAEEAKTLIPSLEGKLDDDELQRALDEISKLRDFS
NT seq 486 nt   +upstreamnt  +downstreamnt
atggccgggcccccaacaacccaaccccaccgccccatacccctctcccgccgccgtccc
ctcccctccggcgacgaagaagcaacctccttcctcaaactcggcgagttcgacaacacc
ccttgcctcagcgtagccgaatgcaacgaactgctcacgcgactcgcggagaaaagcggc
ggcggaaacactcgtcccgcgacgcagaacaacgacgtctacctcaagacgcgcgagtat
gtggagagttttgcgcggttcaaggatagtaagacagtgacgcaggtggatgctattagc
agtgcgcttttggggaggggaaagggggaaggtgtgacgaactttgagagggcgcagttg
gctacactttgctgcgacacggctgaagaggcgaagaccctgatcccgtcgctcgagggc
aagctggatgatgacgagctgcagcgcgcactggatgagatttcgaaactgcgcgacttc
tcataa

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