Baudoinia panamericana: BAUCODRAFT_142160
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Entry
BAUCODRAFT_142160 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K18664
antiviral helicase SLH1 [EC:
5.6.2.6
]
Organism
bcom
Baudoinia panamericana
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcom03019
]
BAUCODRAFT_142160
Enzymes [BR:
bcom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BAUCODRAFT_142160
Messenger RNA biogenesis [BR:
bcom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
BAUCODRAFT_142160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
AAA_30
AAA_19
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
19108418
NCBI-ProteinID:
XP_007679991
JGI:
Bauco1_142160
UniProt:
M2M884
LinkDB
All DBs
Position
Unknown
AA seq
1977 aa
AA seq
DB search
MLPSTDEAASQWLEQLAAMRAAIAALNLPQMNREEGGYKPPTDFDLDDDDLSTSSPLDDI
WDLISDDNDEDQYSEESVEPQAPLVNGFGPTTTSIGTPDWLKQKCIEASSNGSGLDADGL
RDHIAAVLASDSSDEELQMTLADILGFHELDLVSDIIRHRKQLLAQSGEPPSGLLSRAER
DARLRQADLEHKTATLAAAQNRAGEQYPHVYRSHDAGNTLSSQGKRYLLPMGSERIEREK
YEEYSIPAAKVGTLGKHQKLVQIDELDGLCKRTFKGYKALNRMQSLVYPVAYQTSENMLI
CAPTGAGKTDAAMLTILNTVAKNIHPSPVEHPDATEFAVHTDDFKIVYVAPMKALAAEIT
EKLGRRLAWLGIQVRELTGDMQLTKAEIVQTQIIVTTPEKWDVVTRKSTGDTELVQKVRL
LIIDEVHMLHDERGAVLESLVARTERQVESTQSLIRIVGLSATLPNYIDVADFLKVNRMA
GLFYFDQSFRPVPLEQHFIGVKGKPGSKPSRENLDNTAFEKVKEQVEQGHQVMVFVHSRK
DTVKTARLLLDKAQEEGLQDLFDPSGHEGYANAVRDVKQSKGREIRELVAKGLGTHHAGM
PRSDRNLIERLFAEGVLQVLCCTATLAWGVNLPAAAVVIKGTQLYSAEAGKFVDLGILDV
LQIFGRAGRPQFQDTGIGIILTTQDKLQHYLAAVTQQQPIESQFSRKMVDNLNAEIALGT
VTSVPEAITWLGYSYLFVRMRRNPIAYGIDWAEIQNDPNLVQRRRELIVKAARVLQQSQM
IIFNETTEELRAKDVGRIASQFYVLQTSIEIFNTMMQPRATEADILKMISMSGEFDNIQS
RETEQKELVRLKDEAAPCDIDGGIGSQQGKTNVLLQSYISQAHLEDFTLVSDTAYVAQNA
ARICRALFMIALNRRWGYQCLVLLSMCKSIEKRVWPYEHPFRQFDLPQAVLRQLDEKGST
GSIDSLRDMEAAEIGSLVHNQKMGVTIAKLLDNFPTLTVEAEIAPLNRDVLRVKLFITPD
FRWNDRHHGKSESYWVWVENSETSEIYHHEYFILSRRKLYDDHELNFTIPLSDPLPSQIY
VRAVSDRWLGAETVTAVSFQHLIRPDTESVYTDLLNLQPLPIKALKNPMLEEIYGQRFQF
FNPMQTQLFHCMYHTSANVLLGSPTGSGKTIAAELAMWWAFREQPGSKVVYIAPMKALVR
ERVQDWNKRLTRQMGLKLVELTGDNTPDTRTIRDADIIVTTPEKWDGISRSWQTRSYVQQ
VSLVIIDEIHLLGGDRGPILEIIVSRMNYIASQKKGSVRLVGMSTACANAMDLANWLGVK
EGLFNFRHSVRPVPLEIYIDGFPQQRGFCPLMQSMNRPTFLAIKSHSPDKPVIVFVASRR
QTRLTARDLINFCGMEDNPRRFVRMSEDDLALNLDRVKDEALREALSFGIGLHHAGLVES
DRQLAEELFANNKIQILVATSTLAWGVNLPAHLVVVKGTQFFDAKIEGYKDMDLTDVLQM
LGRAGRPQFDTSGIARIFTQESKKAFYKHFLHTGFPVESSLHNVLDNHLGAEVSAETIAT
KQDALDYLTWTFFFRRLHKNPSFYGLEISPEENNSVTAQQAANDYMIEMVDKSLSELAES
QCLLIHSNGDVDPTPLGKIMSYYYLAHKTIRMLTKFAKPAASFSDVLAWMCRATEYDELP
VRHNEDLINAELSNNLPLKAESFGLPMWDPHVKAFLLLQAHFSRIDLPISDYVGDQNSVL
DQAIRIIQASIDVLTEMGYLQSCRQMMTLLQCVKSARWPEDGPLAIFAGVESEKEKKRIE
DASAVPKTLVEATTMPRDAMARTLEQLGLPRASHARVFKALSQLPQLRVSVSEVNALGLT
VNLSRVNAVQDPAYRVYAPRYPKPQTEGYFIIVSDMAKGDVLALKRVSWPSPEKSRGGNV
SKPSTRSLIKLPDSDIERRVKALVVSDSYIGMEWGIEEVEVPAPPRVVDDGAKKKPQ
NT seq
5934 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgtcaacagatgaagcggcctcacaatggctggagcaactggcggccatgcga
gctgcaattgccgccctcaatctgccgcagatgaaccgcgaagagggaggctacaagcca
ccgacagacttcgaccttgacgatgacgacctatcgacatcctctccccttgatgatata
tgggacctcattagcgacgataacgatgaagaccaatacagcgaagagagtgtggagccg
caagcgccgctcgtcaacggtttcggtccgacaacgaccagcatcggaacgcccgactgg
ctgaagcagaaatgtatcgaggcgtccagcaacggaagcggtcttgacgcagacggattg
cgggatcacattgcggctgtgctggcttcagatagtagcgacgaggagctgcagatgact
cttgcggatattcttggctttcacgagctcgatctggtgtcggacatcattcgccaccgc
aaacagcttctagcgcaatcaggcgaacctccttcaggtcttctgtcgagggctgagaga
gatgcgcggcttcgccaggcagaccttgagcataaaaccgccacacttgccgctgctcaa
aaccgcgctggtgagcagtatcctcacgtttaccgttctcatgatgcaggcaatacactc
tcctcacaaggcaaacgctatctgctaccgatggggagtgagagaatagaacgcgagaag
tatgaagagtacagtattcccgctgccaaagtcggcacgctcggtaagcatcagaagctc
gttcagattgacgagttggacggcttgtgtaaacgcacgttcaaaggctacaaggcgctc
aaccgcatgcaaagcctggtttaccctgtagcatatcagacgagtgagaatatgcttatc
tgcgctcctaccggtgcgggtaagacggacgcagctatgcttactattctaaacactgtg
gcgaagaatatacaccccagtccagtggagcaccctgatgccactgaatttgccgtgcac
acagatgacttcaagatcgtctacgtcgcgccgatgaaagcgctcgctgctgagattacc
gagaagctaggcaggaggcttgcttggcttggcatccaagtgcgagagttgaccggcgac
atgcagctcacgaaggcggagattgtccaaacgcagatcattgttaccacgccggagaag
tgggatgttgtgacccggaagagcaccggcgatactgagttagtgcaaaaggtgcgcttg
ctgatcattgacgaagtccacatgctgcacgatgagcggggtgccgtgcttgagtcgttg
gtggcgaggactgagcgacaggtggagagcacacaatcgctcatccgcattgtcgggtta
agcgccactttgccaaactatatcgacgtggcggacttcttaaaggtgaatcgcatggcc
ggccttttctacttcgaccagtcattccgtcccgtgccgctagagcagcacttcattggc
gtgaagggcaagcctggctcgaagcccagcagggagaatctcgacaataccgccttcgag
aaggtcaaggagcaggtggagcaaggtcatcaagttatggtattcgtgcatagccgaaaa
gacactgtcaaaacagcaaggctactacttgataaggcgcaagaggaaggcttgcaagat
cttttcgacccaagtgggcatgaaggatatgccaatgccgtgagggatgtgaagcaatcg
aagggtcgcgagatccgtgagctggttgccaagggtctgggcacgcatcacgccggcatg
ccacgttccgaccgcaacctcatcgaacgtcttttcgcggagggcgtactgcaagtccta
tgctgtacagctacactggcgtggggtgtaaaccttcctgcggcggcggtcgtcatcaag
ggcacgcagttgtacagcgccgaagccggcaaattcgtcgacctcggtatcctggacgtg
ctgcagatctttggtcgagctggccggcctcagttccaagatactggcataggcatcata
ttgaccacccaagacaagctgcagcactatctggccgctgttacgcaacaacagccgatc
gagtcgcaattcagccggaagatggtcgacaatcttaacgccgaaattgcgctcggtacg
gtcacaagcgtgcctgaagccatcacttggctaggctacagctacctcttcgtccgcatg
cggcgcaatccgatcgcatacggtatcgactgggccgagattcagaacgatccgaacctg
gtccagcggcggcgtgaacttatcgtcaaggccgcacgagtgctgcagcagagtcagatg
atcatcttcaacgagaccaccgaggaattgcgcgccaaggacgttgggcgcattgcaagt
caattctacgttttgcaaaccagcatcgagatcttcaataccatgatgcagccacgtgcc
accgaagcggacatcctcaaaatgatctccatgtctggcgaattcgacaacatccagtcc
cgcgagacggagcaaaaggaactcgtgcgcctcaaagacgaagcagcgccttgtgacatc
gatggcggaatcggttcgcagcagggcaagacaaacgtactattgcagtcttacatttcg
caagcacatctcgaagacttcacgcttgttagtgacacggcgtacgtcgctcagaatgct
gcgaggatctgtagggcactgttcatgattgcgctgaatcgacggtggggctatcagtgt
ttggtgcttttgagtatgtgcaaaagcattgagaagagggtgtggccatacgagcatccg
ttccggcagttcgacctacctcaagcggtcctacgacagctggatgagaagggttctact
gggtcgatcgactctttgcgcgacatggaggccgcggagatcggaagtcttgtgcacaat
cagaagatgggggtaacgattgcaaagctactggacaactttccaaccttgaccgtggaa
gcggagatcgcgccactaaaccgcgacgttctccgcgttaagctgttcatcacgccagat
ttccgctggaacgaccgccatcacggcaagagtgaaagctactgggtgtgggtcgagaac
tctgagactagcgaaatctatcatcatgagtacttcattctcagccgcagaaagctgtac
gatgaccacgagctcaacttcaccataccgctgtcggatccgctaccaagccagatctac
gtacgggcagtcagtgatcggtggctaggcgccgaaacggtgacggcagtgtcattccag
catctcattcgaccggataccgagagcgtgtacactgacctgctaaacctgcaacctttg
cccatcaaagcattaaagaacccaatgttggaggagatttatggtcagcgtttccaattc
ttcaatccaatgcagacgcagcttttccactgcatgtaccacacatcagcaaatgtactg
cttggctcgcccacgggctccggcaagaccattgcggcagagctggcgatgtggtgggct
ttccgagagcagcccggcagcaaagtggtctacatcgcacccatgaaggcgctagtgcgc
gagcgagtgcaagactggaacaagaggctgacaaggcagatgggcctgaagctggtcgag
ctgactggtgacaatacgcctgacactcgtaccatcagagacgccgacatcatcgtcacc
acgccagagaagtgggacggtatcagtcgcagctggcagacgcgaagctacgtccagcaa
gtcagcctcgtcatcatcgacgaaatacatctactcggaggtgaccgtggacccattctt
gagatcatcgtaagccgtatgaactacatcgcctcgcagaagaaaggctcggtccggctg
gtgggcatgtcgaccgcttgcgccaatgccatggacctggcgaactggctcggcgtcaaa
gagggactgtttaacttccgacactccgtacgtccagtaccgctggagatctacatcgac
ggctttccacagcagcgtggattctgcccgctcatgcagagtatgaatcggccaaccttc
cttgccatcaaatctcattctccggacaagccggtcattgtgtttgtggcgagtagaagg
cagacaaggctgaccgcgcgggatctcattaacttttgcggcatggaggataacccacga
cgctttgtgcggatgtcggaagacgaccttgcgctgaacctggatcgggtcaaagacgaa
gcgttgcgcgaggcgctgagctttggcatcggcttgcatcatgcaggtctggtcgagtcc
gacagacagctggctgaagagttgtttgccaacaataagatccaaatccttgtcgctact
agtacgcttgcctggggtgtcaacttgccggcgcatctggtcgtggtcaagggcactcaa
ttcttcgacgcgaagattgaaggttacaaggacatggatctgacggatgtgctgcaaatg
cttggtcgtgctggcagaccgcagtttgatacatccggtattgcgcgcatcttcacgcag
gagtcgaagaaggccttctacaaacacttcctgcatacaggatttccggtcgagtcgtct
ctgcacaacgttttggacaaccatttaggtgcagaagtgtcggcggagaccattgcaacc
aagcaggatgcgctggattacttaacctggactttctttttccgaaggctgcacaagaat
ccttccttttacgggctggagatctcaccggaagagaacaatagcgtgaccgctcagcaa
gctgccaatgactacatgatcgagatggtcgacaagtccttatccgagctggcagagtct
cagtgtctccttatccacagcaacggtgacgtcgatcccacgccattaggcaagatcatg
agttattactaccttgctcataagaccatccggatgcttaccaagttcgccaagccagcc
gcctccttctcagacgtccttgcctggatgtgcagagcaaccgaatacgatgagctccct
gtccgccacaacgaagatctcatcaacgcggagctgtcgaacaatcttccgctcaaagcg
gagagctttggattaccgatgtgggatccgcatgtcaaagcattcctgctgctacaggcg
catttctcgcgcatcgatctgcccattagcgactatgttggtgatcaaaattctgtgctt
gatcaggcgatccgtatcatccaagctagcatcgatgtgctgacggagatggggtatttg
caaagctgccgccaaatgatgacgcttttgcagtgcgtcaagtctgcgcgctggccagag
gacggtccacttgccatcttcgctggtgtcgagagtgagaaagagaagaagcggatcgaa
gatgcgagcgctgtgccgaagacgcttgtcgaggcgacgacgatgccgagagatgccatg
gcgaggacgctggagcaacttgggttaccgcgcgcttctcatgcgcgggtgtttaaggct
ctcagccagctgcctcaacttcgagtcagtgtctccgaggttaatgcgctaggactgacc
gtcaaccttagccgagtcaatgctgtacaagacccggcgtatcgtgtatacgccccgcga
tacccaaagccgcagacggagggttacttcatcatcgtctcggatatggcgaagggggat
gttctggctttgaaacgggttagctggccgtctccggaaaagagcagaggcgggaacgtc
agcaaaccttcaactaggagtctcatcaaattgccggatagcgacattgagcggagggtg
aaggcattggtggtgagtgatagctatatcggtatggagtgggggattgaggaggtggag
gtgccagcgccgccaagggtggtggatgatggtgcgaagaaaaagccgcagtag
DBGET
integrated database retrieval system
