Baudoinia panamericana: BAUCODRAFT_151644
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Entry
BAUCODRAFT_151644 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
bcom
Baudoinia panamericana
Pathway
bcom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAUCODRAFT_151644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcom03019
]
BAUCODRAFT_151644
Messenger RNA biogenesis [BR:
bcom03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BAUCODRAFT_151644
mRNA degradation factors
3'-5' decay
Pan complex
BAUCODRAFT_151644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
19109155
NCBI-ProteinID:
XP_007680663
JGI:
Bauco1_151644
UniProt:
M2LE15
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MQPNGSSLPKKSLNVESPAFTPNFTPKISAAQPVKSFGISPKFATAAAFTPSGSGTLTPS
HMKAPSDEFITPHSFQPAQQFAEFVPGQSFMSPSQIEHSPQIQPQINPYNDPFMPQQSLH
QAIPSLDGSQQTINPYATTAQTVAGQPFYPDNNSYKHPLNYHLYASVGPRRENMQPYQRA
SADFFIPDNLREDLQKKSEAALQTFANSTLPQSVEYFHSLVALDTTSQRGTSTYGYPSWI
YKATSSKDGHTYALRRIEGFRLTNEQAIRSFHAWKRVNSASIVQVHDAFTGRWFGDSSLI
VVTDYHPLAQTLADKHFTSSRPNRTSAQFVPESELWSYIVQLASALKTIHEAGLAAQTVM
ASKVLLTSKNRLRLSGCGVLDILQYEQRRPVTELQRVDLEDLGRLILGVAARNPTAHQSV
DKSLQFISRTYSERFRLCLAWLLTPPSQSASHSPLSPTTTPPSDQAPSASEHNINSLLTN
IADKVVATLDSTLHYEDELTNNLMRELENGRLVRLLTKLNVILERPETTTTGPTTGPTNT
STTSSNNSNAWSETGERYYLKLFRDYVFHQIDHEGRPVLDLGHIVTCLNKLDVGVEERVQ
LVSRDEQNVFVVSYREVKRGFEAAWGEISKAAAGGRR
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctaacggctccagcctcccgaagaagagcctcaatgtcgagtcgccagctttc
acgccaaacttcacgccgaagatatccgctgcgcagcctgtcaaaagtttcggcatatcg
ccgaaatttgcaactgcagccgctttcacgccaagtggttccggcacactcacgccatcc
cacatgaaagcaccgtccgacgagtttatcacaccgcattcattccaacccgctcaacag
ttcgcagagtttgtgccaggccagagcttcatgtcaccatcccagatagaacattcaccg
cagatccaaccgcaaatcaatccatacaatgaccctttcatgccgcagcaaagccttcac
caagccataccgagccttgacggctcgcagcaaacgatcaatccgtatgcgactactgcg
caaacggttgctggacagccattctacccagataacaatagctacaagcaccctctaaac
taccatctgtacgcctcagtaggtccgcgccgcgagaatatgcagccgtatcagagagcg
tcagccgacttcttcatccccgacaatctgcgcgaagacttgcagaagaagtccgaagcc
gcactgcagaccttcgcgaacagcacgcttccgcagagtgtggagtacttccattctctc
gttgcgctagacactaccagccaacgaggcacttccacctacggataccctagctggata
tacaaggccacttccagcaaagacggacacacgtacgcactgcgccggatcgaaggcttt
cgacttacgaacgagcaagccatccgtagcttccacgcctggaagcgagttaacagtgcc
agcatcgtgcaagttcacgacgccttcaccggccgatggttcggcgatagctcgctgatc
gtcgtgaccgactatcatcccctggcgcagacgctggccgacaaacacttcacctcctcc
cggcccaacaggacaagcgcgcagtttgtacctgagagcgagctgtggagctatatagtc
cagctcgcgagcgcgctcaagactatacatgaagccggcctggcggcgcagaccgtcatg
gcctcaaaagttctgctaacgtccaagaaccggctccgtttgagtggatgcggcgtgctc
gatatccttcaatacgaacaacgccggcccgtcaccgaactccaacgcgtcgacctcgaa
gacctgggtcgcttaatcctaggcgtcgccgcacgcaaccccaccgctcaccaaagtgtc
gacaaaagcctacaattcatcagccgaacatacagcgaacgcttccggctctgtctcgcc
tggctgctcactccaccatcccaatccgcatcacacagtccgctttcgccaacgacaaca
ccacccagcgaccaggcaccctccgcaagcgaacacaacatcaacagcctcctgaccaac
atcgcagataaagtcgtcgccaccctagacagcacgctccactacgaagacgagctaacc
aacaacctcatgcgcgagctcgagaacgggcgtctcgttcgcctcctaaccaaactaaat
gtcatccttgaacgacccgaaaccaccaccaccggccctaccaccggccccaccaacacc
agcaccaccagcagcaataacagcaacgcctggtccgaaacaggcgagcgctactacctc
aagctcttccgcgactacgtcttccaccaaatcgaccacgaaggccgccccgtgctggat
ctgggccatatcgtcacgtgtctgaataaactggatgtcggggtggaggagcgggtgcag
ttggttagtcgggatgagcagaatgtttttgtggtgagttatcgcgaggtgaagaggggg
tttgaggcggcttggggggagattagtaaggcggctgctgggggtaggaggtga
DBGET
integrated database retrieval system