Baudoinia panamericana: BAUCODRAFT_221487
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Entry
BAUCODRAFT_221487 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
bcom
Baudoinia panamericana
Pathway
bcom03022
Basal transcription factors
bcom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BAUCODRAFT_221487
09124 Replication and repair
03420 Nucleotide excision repair
BAUCODRAFT_221487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcom03021
]
BAUCODRAFT_221487
03400 DNA repair and recombination proteins [BR:
bcom03400
]
BAUCODRAFT_221487
Enzymes [BR:
bcom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAUCODRAFT_221487
Transcription machinery [BR:
bcom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BAUCODRAFT_221487
DNA repair and recombination proteins [BR:
bcom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BAUCODRAFT_221487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
19109863
NCBI-ProteinID:
XP_007679051
JGI:
Bauco1_221487
UniProt:
M2N525
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MAPKRKAPATDGRPSKRVASGISTPVSIDSDDDYSESDALSGDGRQTPVRQKKYDAVINK
YQPSTYDAAKKKAFKADPAGHLFKSNRDFVDEQLKPDHRLRPLWIDRHRGRVVLETFSPS
FKQAQNFLINIAEPQSRTTNMHEYTINAHSLFAAVSVGLTEQDIVRQLELFSKTKVPESM
IEFVHSVTQSFGKVRLVLKHNRYFIESQDASVLQMLLRDPVISTCRVEESDELRTEKAAK
MGGLIIPGTREAQGNREAQARLEQQQKQRREQGEDESDDEFGGQEAEKDMTEFLREEEDD
DELDEVHSFEIDGSKIQIVQEHCNVKLGLPLTEEYDFRADEQNATLDIDLKPQTQIRYYQ
EHALSKMFGNGRARSGIIVLPCGAGKTLVGITAACTEKKSVIVLCTSATSAGQWRAEFIK
WSNVNPDDVIIFTSTEKGRVPNRACIIVCTYSMVTQNTRRAHDSKQTMDQITSREWGLMV
LDEVHVVPAEMFRRVTERIKTHSKLGLTATLLREDDKIKDLNFLIGPKLYEANWLQLSEE
GHIARVQCAEVWCPMTTEFYSEYIQAQTTNKKSLLSIMNPRKFQACQFLIDFHERRGDKI
IVFSDNVYALKQYAEGLKKPYIYGDTGQRERDLVLQNFQFNDAVSTIFLSKIGDTSLDLP
EATCLIQISSHYGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTNEMYYSSKRQAF
LVDQGYAFKVITHLNGIDRMPDLRFSTQEERMTLLTDVLLQSETAGDEEKIVDDLFSDRA
TFRKSGVGKKGSGVKRQAGTLASLAGGEDMAYLEYAKGSRSNKALAGPRSAFFRKEDRDR
ERRKKAQRELMD
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaaacgcaaggcgccagcgacagacggtcgaccttccaagcgagtcgcctct
ggtattagcacgcctgtaagcatcgacagcgacgatgattacagcgagagtgatgctcta
tcgggagatgggcgacaaacaccggtgcggcagaaaaagtacgatgcagtgatcaacaag
taccaaccgtctacatacgatgcagcgaagaagaaggcctttaaggccgatcctgccggc
catctcttcaaatcgaatcgtgacttcgtcgatgaacaactgaagcctgaccatcgactg
cgtccgctgtggatcgacaggcatagaggaagggtagtacttgagaccttctcacccagc
ttcaagcaggcgcagaactttctcatcaatattgcagagccacaaagtcggacgacgaat
atgcacgagtacacgatcaacgcgcatagtctctttgcggcagtctcggtaggtcttacc
gaacaagatatcgtgcggcaactggaactcttttccaagacaaaggtgccagaaagcatg
attgaatttgtacacagcgtcacgcagtccttcggtaaagtgcgtcttgtattgaagcat
aatcgatatttcattgagagtcaagacgcttcggtactccagatgctgttacgtgatcca
gtcatcagcacgtgccgtgtcgaggaatccgacgagctacgcacggaaaaggcggcgaag
atgggcggcttgattatacccggcacaagagaagcacaagggaaccgagaggcgcaagcc
cggctggaacagcagcaaaagcagaggcgagagcagggcgaggacgagtccgatgatgaa
ttcggtggccaggaggcggagaaggacatgacggaatttctccgcgaagaggaggatgat
gacgaattggatgaagtgcattcgttcgaaattgatggcagtaagattcagatcgtgcag
gaacactgcaatgttaagcttggcctacccttgacagaagagtacgatttccgggctgat
gagcaaaatgccacgcttgacatcgacttaaaacctcagactcagatccggtactaccaa
gaacatgccctcagtaagatgttcggcaacggtcgtgcccgaagcggcatcattgttcta
ccttgcggcgccggcaagacgctggttggtattaccgcagcctgtacggagaagaagagt
gttatcgtcctctgcacgagcgccaccagcgcgggccaatggcgtgcagagttcatcaag
tggtccaacgttaatcctgacgatgtcatcatcttcacctcaaccgagaaaggacgtgta
cctaaccgtgcctgcatcatagtatgcacatacagcatggtgacgcaaaatacacggcgc
gcacacgatagcaagcagacaatggaccagattacgagccgcgaatggggactcatggtt
ctggacgaagtgcacgttgtcccggcggagatgttcaggcgggtgactgagcgcatcaag
acgcattccaagcttggccttaccgccacactacttcgtgaagacgacaagatcaaggat
cttaactttctcatcggtcccaagctctacgaagccaactggctgcagctcagcgaagaa
ggccatatcgctcgggtgcaatgtgccgaggtgtggtgtccgatgacaaccgagttctac
agcgaatacatccaagcacagacgacgaacaagaagagccttctctccatcatgaacccg
cgcaagttccaagcctgccaattcctcatcgacttccatgagcgacgtggggacaagatc
atcgtcttctccgacaatgtctacgctctgaaacagtacgccgaaggacttaagaaaccg
tacatctatggcgataccggtcaacgcgaacgcgacttagtcttgcagaacttccagttt
aacgacgcagtctccaccatcttcctgtccaagattggcgacacctcactcgacctaccg
gaagctacatgcttgattcagatatcttcgcactacggctcgcgaagacaagaggcgcag
cgtcttggccgcatcctccgcgccaaacgccgcaatgacgaaggattcaacgctttcttt
tactcgctcgttagcaaagacacgaacgagatgtactactccagcaaacggcaagccttc
cttgtcgaccaaggctacgcattcaaagtcatcacgcacctgaacggcatagatcggatg
cccgatctccgcttcagcacgcaggaagagcgcatgacgctgcttaccgatgtcttgcta
caatccgaaacggctggtgatgaggagaaaattgtcgacgatctcttctcggaccgtgcc
acttttaggaagtctggagtggggaagaagggtagtggggtaaagcggcaggccggcacg
cttgcgagtttagctggcggagaagatatggcgtacctggagtatgcgaaaggtagtcgg
agtaataaggcactggccgggccgcggagcgcgttcttcaggaaggaggatagagaccgg
gagaggaggaagaaggctcagagggagctcatggattag
DBGET
integrated database retrieval system
