KEGG   Baudoinia panamericana: BAUCODRAFT_228826
Entry
BAUCODRAFT_228826 CDS       T03106                                 
Name
(RefSeq) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
bcom  Baudoinia panamericana
Pathway
bcom03020  RNA polymerase
bcom03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bcom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BAUCODRAFT_228826
  09124 Replication and repair
   03420 Nucleotide excision repair
    BAUCODRAFT_228826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bcom03021]
    BAUCODRAFT_228826
   03019 Messenger RNA biogenesis [BR:bcom03019]
    BAUCODRAFT_228826
   03400 DNA repair and recombination proteins [BR:bcom03400]
    BAUCODRAFT_228826
Transcription machinery [BR:bcom03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     BAUCODRAFT_228826
Messenger RNA biogenesis [BR:bcom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     BAUCODRAFT_228826
DNA repair and recombination proteins [BR:bcom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      BAUCODRAFT_228826
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 19109943
NCBI-ProteinID: XP_007679422
JGI: Bauco1_228826
UniProt: M2N2B1
LinkDB
Position
Unknown
AA seq 171 aa
MFFVKTLEHRLTLHPSYFSAQSQAYIEEQLYREQEGKNTGTMLIIAIIDIEDVSEPKVVP
GSGLAQYDVSFRAIVWRPFRGEVVDGLVSSVISGGFFVDVGGLAVFVSKALIPPQLKFSV
EGSAPSYTDNVDQTIERGTQVRLRIKGIRAEMGQMYAIGSIREDYLGPLMQ
NT seq 516 nt   +upstreamnt  +downstreamnt
atgttcttcgtcaaaacactcgaacaccgcctcacactccacccttcctatttctccgcc
caatctcaggcctacatcgaggagcagctttaccgcgaacaagaaggcaaaaacacaggc
actatgctaatcattgccattatcgatattgaagatgtcagtgaaccgaaggtggtgcca
ggcagcgggctggcgcagtatgacgtctcgtttcgcgcgatcgtctggaggccgttccgg
ggcgaggtagtggatggattggtgagtagcgtgattagtggaggattctttgtggatgtg
ggtggacttgccgtcttcgtttccaaagctttaattccgccacaactcaagttctctgtc
gagggctctgcgccgtcatatacggacaatgtggaccagacgattgagcgaggcacgcaa
gtgagactcagaatcaagggcatccgggcggagatggggcagatgtatgccattggcagc
atacgggaggactatttgggtcctctcatgcaatga

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