Baudoinia panamericana: BAUCODRAFT_261696 Help Entry BAUCODRAFT_261696 CDS       T03106                                  Name (RefSeq) hypothetical protein   KO K14442   ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] Organism bcom  Baudoinia panamericana Pathway bcom03018   RNA degradation Brite KEGG Orthology (KO) [BR:bcom00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     BAUCODRAFT_261696  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bcom03019]     BAUCODRAFT_261696    03012 Translation factors [BR:bcom03012]     BAUCODRAFT_261696 Enzymes [BR:bcom01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      BAUCODRAFT_261696 Messenger RNA biogenesis [BR:bcom03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      BAUCODRAFT_261696 Translation factors [BR:bcom03012]  Eukaryotic type   Initiation factors    Initiation associated factors     BAUCODRAFT_261696 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Helicase_C OB_NTP_bind DEAD HA2_C HA2_N AAA_19 dsrm FtsK_SpoIIIE AAA_22 Motif Other DBs NCBI-GeneID:  19110383 NCBI-ProteinID:  XP_007680100 JGI:  Bauco1_261696 UniProt:  M2LFE9 LinkDB All DBs Position Unknown AA seq 1482 aa AA seqDB search MAVPSVWLRLPPAVRLHLFAHAAAAERLSLLRATALQARTKHAIQCSASKPYRRAYATVA HQDAKDMREAYHFNVKPGPTAEPAQTKGQHQGKPAEIFEGQGSLVLPPPGDYIGAPADLF IPERMSSGVHALCSQAKQKCKATETFSAGYTSKKIIWYSCDLSLTVSNGYSDKVTASGSS KKAAKRAAWEQILARMHANGILRQLMQPRAAKARSDPVASFVEKQRLPPNFPTKDQYPHA NSALFDPRSIQSEIHNHCISVGLALQSDYDYKASGQSWSCTLKVEVPDLCSETTSANDTS KAGARHAAWVAMLTRMHEKGILRELWPNAPGQERLVDEQGAESEATVLSKEVMAAEKDAK VEIYNYAAGFGLVPEFDIKQVQIRPSRSRLGRLARKSRSAKPGVRVTIKLAEQGIEATCI GDNLQTAEITASLRLKQQAEARQQSLPSDASVQSSRVLNTESARLYFDFYKQENPRTWIE IEHEQSSLLGVTRQTAQVTINGRQIGQTVAMNSKKQAEAVALLVAAVVLCRENPSMLQEF ERRLRRDKGKVLRQLSAIDLPVDTESAYIMRTALVEARKAGLPDARETLSAEEDDSVTAI NYPRKRRQLDRKQVDFLSKHLVKKQQAFEKNSSLQNLHAAKAALPMNQYRQDVIGMVSNH PHSIIVGATGSGKTTQVPQILLEHEIASGQGGSCNIVCTQPRRIAATSVAQRVAVERNED LGQSVGYHVRFDQRLPESGGSIIYCTTGILLEQLKHDPDGTLDAISHLVVDEVHERDINI DFLMIIIKKALAARLAAGKSTPKVVLMSATLDTELFANYFSTEGKPCPSLTVPGRTYPVQ EQYLEDVMLDLHKHVPGLDALLATDKASEEYLKSERAFSAVDVDTQPPTDSVIDWKRAGQ HPVGAEEAGNAAAEKEEALVPTALLAAVIARICKTTKDGAILAFLPGIDEILKTQASLLE SIFADLDFGDPLKFRICLLHSMVPKDEQAAIFGQPPPGCRKIILSTNIAETSITVTDVKH VVDTGKLRELRYDQLRRITKLQCVWESKSNAKQRAGRAGRVQDGYYWALHSKERHNSLKA VGLPELLRVDLQETVLSIKAQRFKEPVEELLEQAIEPPPTQAIRAARDNLQAIEALTGDE RLTMLGRLLSKLPVHPTLGKMIVLGVIFRCLDPMLIFGAAANERSLFINPIAAEPRAAAN RVRRAYAGEHSSDHLAILRAFREIRAIQRQDGQPSAYRRAVERNIHIGAFKTIDQTARQI LEVLGETGLIPRILGSHQRETVYGSAELNRNSDNPILIQALLLAGLYPNLGAKVSERGSS YRTPNEHGVLMHPASLNDDIGRKEKKHRSGTLFAFSSLSQSNDGKCIFMRDSTMVSPLTA VLFGGRLQMSDSIRLSMDDWLPFFVQASDRQFATKLLLEFRKALDRVLNNAFRDLSNLDL SGHGTSFVDDNIRAAFTDKVVQLLDQTSGRAHAQAFNLLQPL NT seq 4449 nt NT seq  +upstreamnt  +downstreamnt atggcagttccgtcggtatggctaaggctcccgcctgccgtacggttacatctcttcgcc catgccgcggcagcagagcggctgagcttgctgcgtgcaactgcactccaagcaaggact aagcatgcaatccaatgtagtgcatctaaaccctaccgacgtgcgtacgccaccgtcgct catcaggatgccaaggatatgcgggaggcgtaccatttcaacgttaagccgggcccgacc gctgaaccagcgcagaccaaaggccaacaccaggggaagcctgcagagatatttgaaggt caaggatcgcttgtgctacctccaccgggtgactacataggcgcgccagctgatctattc atacctgagcggatgtcttcaggtgtccatgcactctgttctcaagccaaacagaaatgc aaggctacagagaccttctctgctggttataccagtaagaagataatctggtattcctgc gatctcagtcttactgtaagcaatggctatagtgacaaggttaccgcgtctggatcctcg aagaaggcagcgaaacgcgcagcctgggagcagatcctcgcccgtatgcacgccaacggt atcttgaggcagttgatgcagcccagagcggctaaggcaaggtcagatcctgtggcatca tttgttgagaagcaacgcctaccgcccaactttcctaccaaggatcaataccctcatgcc aacagtgctctttttgatccgaggtcgattcagagtgaaatccacaaccactgcataagt gtagggcttgcgttacagagtgactatgactataaagcgagtggacaaagctggagctgc acactgaaggttgaagtcccggatctatgctcagagacaacctccgcgaacgatacctcg aaagcaggtgcccgacatgcagcatgggttgctatgctgacacggatgcatgagaaaggc attctgcgcgaattatggcccaatgctcctggccaggagcgtctcgtggatgaacaaggc gctgaatccgaggcaacggtgctaagtaaggaagtgatggctgcagagaaggatgccaaa gtggaaatatacaactacgctgcaggcttcggtttggtgccagagtttgacattaagcag gtacaaatcagaccttctcgttcaaggctcggccggctcgctcgcaaaagtcgcagcgca aagcctggggtgagagtgaccatcaagctggcggagcaaggtatagaagctacttgcatc ggtgacaacctccaaaccgcagagattacagcatcacttcgcctcaagcagcaagctgag gcaagacaacagtctctgccgtcagatgcctccgtgcaaagttcacgtgttctgaatact gagtctgcgaggctctatttcgacttctacaagcaggagaatccacgtacttggatcgag attgagcatgagcaaagctcgttactcggagtgacacgtcaaactgcccaggtcaccatt aatggaagacagatcggccaaaccgtggcaatgaactcgaagaagcaggcggaggctgtc gcgctgctcgttgccgccgtagtcttgtgcagagagaacccttcgatgttgcaggagttt gaacggagactgcgaagagacaagggcaaagttctcagacagctgtcggccattgaccta cctgtcgacacagagtctgcatacatcatgcgcactgccttggttgaagctcgcaaggca ggcttaccggacgcgcgggagactctgtctgctgaagaagacgacagtgtcacagctata aactatcctcgcaagcggagacagcttgatcggaaacaagtcgatttcttgagcaagcac ctagtgaagaagcagcaggctttcgagaagaattcaagtctgcagaatcttcacgcggca aaggccgcgctacccatgaatcagtatcggcaagatgtcattgggatggtatcgaatcat cctcacagcattatcgtcggcgccaccggtagtgggaagaccacgcaagtaccgcagatc ctattggaacatgagatcgcctccggccagggaggatcatgcaatatcgtatgcacgcag cctcgccgaatcgctgccacttcagtcgcgcagcgtgttgcggtcgaacgtaatgaagat ctgggccaatcggttggttaccacgttaggttcgatcaacgcctaccagaatccggcgga agtataatctactgcacgacgggtatactgctcgagcaactcaagcacgaccccgatggc acgttggatgcaatatcacatcttgtggttgacgaagtgcacgagcgtgacatcaacatt gatttcctaatgatcataatcaagaaagcccttgcagcacggcttgccgctggcaagtca acaccaaaggtggtgcttatgtctgcgacgctcgataccgaactcttcgcgaactacttc tccaccgagggcaaaccgtgcccttctctgaccgtgcccggacgaacctaccccgttcaa gaacaatacctcgaggacgtgatgctggatctccacaagcacgtacctgggcttgacgca ctccttgccacggacaaggcaagcgaggagtatcttaagtcggagcgggcattcagtgcc gtggatgtcgatacgcagccgccgactgacagtgttatcgactggaaacgggccgggcag caccccgttggcgccgaggaagccggcaatgctgcagccgaaaaagaagaggcattagta cctactgctctgcttgccgcagtcatcgcacgcatctgtaagacgaccaaagacggtgca atattagcgttccttcccggcatcgacgagattttgaagacacaggcttctttactggag tctatcttcgcagatcttgacttcggcgaccccttgaagttccgcatctgcttgctgcat tctatggtccccaaggatgagcaggctgccatctttggacaaccaccaccaggatgccgc aagatcattctatcgacaaacatcgctgaaacctccattacggtcactgatgtcaagcat gtcgtggataccggcaagcttcgagagctcaggtatgaccaactccgacgcattacgaaa ctccagtgcgtctgggagagcaaatcgaatgcgaagcagagagccggccgggcgggccgt gtgcaagatggctactactgggcactgcattcgaaggagcgacacaactctctgaaggct gtgggcttgccggagctactgcgcgttgatctgcaggagaccgtgttgtcaatcaaggcg caaaggttcaaggagcctgtggaagaattgctcgagcaggcaatcgagcccccgcccacc caagccataagagctgcaagagacaatttacaagccattgaggccttgaccggggacgaa aggctcacgatgcttgggcgtttgctctcgaagttgccggtgcatcctaccctgggcaaa atgattgtgctcggcgtcatctttagatgcctggaccccatgctcattttcggcgcagca gcaaatgagcgctcgctcttcatcaatccgatcgcagctgagcctcgagccgcagccaac cgagtccggcgtgcttatgcaggcgagcactcaagtgaccatttagccattcttagggct ttcagggagatccgcgcgatacagcgtcaagacggccaaccctcagcttaccgccgagcg gtggagcgaaacattcacattggagctttcaagaccatcgaccagactgcgcggcagatc ttagaagtccttggagagactggactgatacccagaatattagggagccatcagcgcgag acggtctacggatcagccgaactgaaccgcaactcagacaatcctatcttaatacaagca cttcttttggcaggtctgtaccctaatctcggggccaaggtatccgagagagggtcctcg tacagaacgccgaacgagcacggagtgcttatgcatcccgcgtctctgaacgacgacatc gggcgcaaggagaagaaacatcgctccggcacgctcttcgccttcagcagcctcagccag agcaacgatggcaagtgcatcttcatgcgggactctacaatggtcagcccactcactgct gtcctgttcggcggaaggctgcagatgagcgacagcattcggctgtcaatggatgactgg ctgcctttctttgtgcaggctagcgaccggcagtttgcgacgaagcttctgttggagttt agaaaggcattggatagggtgctgaacaatgcgttcagggatctttcgaatcttgatttg tcagggcatggcacgtcgtttgtggacgacaacatccgggcagcgtttacggataaggtg gtgcaactgctcgatcagacaagcggaagagcgcatgcacaagcgttcaatctccttcag cccctgtaa

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