Baudoinia panamericana: BAUCODRAFT_26655
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Entry
BAUCODRAFT_26655 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
bcom
Baudoinia panamericana
Pathway
bcom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAUCODRAFT_26655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcom03019
]
BAUCODRAFT_26655
Messenger RNA biogenesis [BR:
bcom03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BAUCODRAFT_26655
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BAUCODRAFT_26655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
19110460
NCBI-ProteinID:
XP_007679146
JGI:
Bauco1_26655
UniProt:
M2N2Z1
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MNTYAPTQQQARQTPRLQNTSKPSLGNGLGGSGWGGGGLGLGAGLGGGLGGAARPPALSG
FAQVMGGGSGQGPIDMSLCYGHELACHACACLARACYCSLAYVNDALWQKADLSAAGLAN
IDSLSDFPSLSGGPRANSSSAASGWNNNPLRQLPQAQAPASHQQQPQAQSQQQQRAPSAA
PSQQSTEQYDGSRSQQPSSDRERATTGEDFPPLGGQMNGDTGSGQSVGFNSTIASPDVSS
QARNLHPQQSQQLPMRTAEGIGAFQQQLQQGPMGSAQSAQSLQPQLSAPNGQPAGNSTKR
YADMTESEKYGLTGLLAGFEARRQLEAGQPVDESLPPAMRNGVFMGQDLGALGMELDNPD
PIYPTFSVFAGSGSGRSQFDFHERHVVPDFTLPSAYTVSNVPPLQSRMGAFSDETLFSIF
FQYPRSIEQELASIELTARDWRWHRLLRQWLQKDTRETNSSGSLPLVDLAQNQPVGAAPV
RVNERVERGVYVFFDAPNWRRERREFVLDYSELDHRHAGGGGAQAPPQTNGVGIGPAPGL
AVGGPVQAPVATGPQSVTASHAGGSSVG
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttacgcgccaactcagcaacaggcacggcagacaccaagactgcagaacacc
agcaagccttcacttggcaatggtctaggtggcagtggatggggcggtggtggccttggg
ctcggtgcgggtctcggtggcggactgggaggtgctgcgcggcctccagcgctcagtggc
tttgcacaggtcatgggtggtggcagcggtcaagggcctattgatatgagcttatgctac
ggtcacgagcttgcctgtcacgcatgtgcgtgcctcgctcgtgcctgttattgttcgctt
gcttacgtaaacgatgctctatggcagaaggcagatctctccgcagctggacttgctaac
attgattctcttagcgacttcccttctctctccggaggacctcgggccaattcaagtagt
gccgcttcgggatggaacaataacccattacggcaattaccacaagcacaagcaccggcc
tcacatcaacagcagccgcaggcgcaatctcaacagcagcagagagctccttcggcggca
ccttcacagcagtctacagagcagtacgatggctccaggtcacagcagccatcatcagac
cgagaacgagccaccactggcgaagactttccgcctttaggggggcagatgaacggtgac
actggtagtgggcaaagcgtcggctttaacagtaccatagcttctcccgatgtcagctca
caagcccggaatctccatccacagcaatcgcagcaactgccaatgcgaactgcggagggt
atcggcgccttccagcagcaactgcaacaggggccgatggggtctgcacagtcggcgcag
tctctacagcctcaactaagcgcaccgaatggccagcctgcaggcaatagtacgaagaga
tacgctgacatgaccgaaagcgaaaagtatggccttaccgggttgcttgcgggcttcgaa
gcacggcggcaactagaagcaggtcagccggtggacgaaagtctaccaccagcgatgcga
aatggggtcttcatgggccaggatcttggcgcgttaggaatggagttggacaacccagac
cctatctacccgaccttctccgtctttgcgggcagcggtagcggcaggagccagttcgac
tttcatgagagacacgtcgtgcccgatttcactttacccagcgcttacactgtgagcaac
gtgcctccactgcagagtcgcatgggtgctttcagtgacgagacactgttttccatcttc
ttccagtacccgcgctcaattgagcaagagctcgccagcatcgaactgacagcacgagac
tggcgatggcacagactgctgcggcagtggttgcagaaagacacgcgtgaaacaaattca
tcgggatcactaccgcttgtcgacctggctcagaaccagccggtgggcgcggcgcccgtc
cgtgtcaatgagcgggtggagcgaggagtttatgtcttcttcgatgcgccaaactggcga
cgagagcggagagaatttgtgctcgactacagtgagctggatcacaggcacgccggtggg
ggcggggcgcaggcgcctccacaaacgaacggagtcggtatcgggcctgcgccaggcctc
gctgttgggggccccgtacaggctccggtggcgactggcccacaaagcgtgacggcatca
catgcaggtggaagtagcgtgggctag
DBGET
integrated database retrieval system
