Baudoinia panamericana: BAUCODRAFT_34961
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Entry
BAUCODRAFT_34961 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
bcom
Baudoinia panamericana
Pathway
bcom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAUCODRAFT_34961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcom03019
]
BAUCODRAFT_34961
Messenger RNA biogenesis [BR:
bcom03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BAUCODRAFT_34961
mRNA degradation factors
5'-3' decay
Lsm complex
BAUCODRAFT_34961
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
19112570
NCBI-ProteinID:
XP_007677376
JGI:
Bauco1_34961
UniProt:
M2MTV0
LinkDB
All DBs
Position
Unknown
AA seq
198 aa
AA seq
DB search
MEHLSLHDAGAGPPPGQHPPGPPHMSQQPQGPMPTPPPQMMPPGPGQQQMGMGPPGAPVV
AQLPPQMFTTAAQLLDLTDKKLMVALRDGRKLIGVLRSWDQFGNLVLQDTVERLFVQNVY
ADIDRGLFLVRGENVSLLGEIDLDKDDYIPEPYQLASVEKVFALKKAEDAERKKTDKTKQ
KRLADLGFEVEHSGEAII
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggagcatctcagcctccatgatgctggtgctggcccaccaccgggccagcacccgcct
ggaccgccacatatgagccaacagccacaaggtccaatgcctactccacctccacaaatg
atgcctccaggtcccggccagcagcagatgggtatgggtcctcctggcgctcctgtagtg
gcacaactaccgccacagatgttcacgactgccgcccaactactggatcttacggacaag
aaactgatggttgcgctaagagatgggcggaaacttatcggtgtattaagaagctgggac
cagtttggcaaccttgttttgcaggacacggtcgaaagactgttcgtgcagaatgtgtat
gcggatatcgatcgaggtttattcctggtacgaggggagaacgtgagcttgcttggggag
atcgacctggacaaggacgattacatcccggaaccttatcagcttgcgtcggtcgagaag
gtctttgcattgaagaaggccgaggatgcagaacgcaagaagaccgacaagacgaagcag
aagcgactcgccgacttaggctttgaagtggagcatagcggcgaggctatcatatga
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