KEGG   Baudoinia panamericana: BAUCODRAFT_34961
Entry
BAUCODRAFT_34961  CDS       T03106                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
bcom  Baudoinia panamericana
Pathway
bcom03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcom00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BAUCODRAFT_34961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcom03019]
    BAUCODRAFT_34961
Messenger RNA biogenesis [BR:bcom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     BAUCODRAFT_34961
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     BAUCODRAFT_34961
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 19112570
NCBI-ProteinID: XP_007677376
JGI: Bauco1_34961
UniProt: M2MTV0
LinkDB
Position
Unknown
AA seq 198 aa
MEHLSLHDAGAGPPPGQHPPGPPHMSQQPQGPMPTPPPQMMPPGPGQQQMGMGPPGAPVV
AQLPPQMFTTAAQLLDLTDKKLMVALRDGRKLIGVLRSWDQFGNLVLQDTVERLFVQNVY
ADIDRGLFLVRGENVSLLGEIDLDKDDYIPEPYQLASVEKVFALKKAEDAERKKTDKTKQ
KRLADLGFEVEHSGEAII
NT seq 597 nt   +upstreamnt  +downstreamnt
atggagcatctcagcctccatgatgctggtgctggcccaccaccgggccagcacccgcct
ggaccgccacatatgagccaacagccacaaggtccaatgcctactccacctccacaaatg
atgcctccaggtcccggccagcagcagatgggtatgggtcctcctggcgctcctgtagtg
gcacaactaccgccacagatgttcacgactgccgcccaactactggatcttacggacaag
aaactgatggttgcgctaagagatgggcggaaacttatcggtgtattaagaagctgggac
cagtttggcaaccttgttttgcaggacacggtcgaaagactgttcgtgcagaatgtgtat
gcggatatcgatcgaggtttattcctggtacgaggggagaacgtgagcttgcttggggag
atcgacctggacaaggacgattacatcccggaaccttatcagcttgcgtcggtcgagaag
gtctttgcattgaagaaggccgaggatgcagaacgcaagaagaccgacaagacgaagcag
aagcgactcgccgacttaggctttgaagtggagcatagcggcgaggctatcatatga

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