Baudoinia panamericana: BAUCODRAFT_35017
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Entry
BAUCODRAFT_35017 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
bcom
Baudoinia panamericana
Pathway
bcom03030
DNA replication
bcom03410
Base excision repair
bcom03420
Nucleotide excision repair
bcom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAUCODRAFT_35017
03410 Base excision repair
BAUCODRAFT_35017
03420 Nucleotide excision repair
BAUCODRAFT_35017
03430 Mismatch repair
BAUCODRAFT_35017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcom03032
]
BAUCODRAFT_35017
03400 DNA repair and recombination proteins [BR:
bcom03400
]
BAUCODRAFT_35017
DNA replication proteins [BR:
bcom03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
BAUCODRAFT_35017
DNA repair and recombination proteins [BR:
bcom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
BAUCODRAFT_35017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
AAA_16
nSTAND3
AAA_33
RuvB_N
AAA_14
BRCT_2
NACHT
AAA_28
Rrn6_HB
AAA_30
AAA_18
RNA_helicase
AAA_2
AAA_11
Motif
Other DBs
NCBI-GeneID:
19112583
NCBI-ProteinID:
XP_007677389
JGI:
Bauco1_35017
UniProt:
M2LL86
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MKDTNNDDDFVVPDEDEKIVKDKPAKKTPSKASRKRKSAVLEEEDEDDLDMEEAKPAKKR
ATPAKKAAKQDAPQDSAEVAAILNSIPTIKAPSPPPKSGAEGEKPKFQFGQHANSAVPAA
AISSSELPQGADNCLAGLTFVFTGQLERLGREQGQELVKQYGGKVTGAPSSKTSYVVLGE
DAGPKKLETIKKNNLKVINEEGLFELIKRLPANGGDSAAAGKMAEKRAKEEEQMRKAVEE
MDKQEAAVKLKIQAAAAAASADKGGTPKGKGKTPVDGPDTRLWTVRYAPQQLSQICGNKA
QVDKLQRWLRNFPKSQRVGFKMPGPDGSGTHRAVMIHGPPGIGKTTAAHLVAKLEGYDIV
ESNASDTRSKKLVDTGLKGVLSTTSLMGYFASGTDSVEASKKKLVLIMDEVDGMSAGDRG
GVGALAAVCKKTQIPMILICNDRKLPKMKPFDFVTYDLAFRRPTTDQIRSRISTIAFREG
LKMPANVINALIEGSGADIRQVVNMISTAKLDSQTLTYEEGKDMSKAWEKHIVLRPWDMV
AKILGGGLFNPAAKSTLNDKQELYFNDHEFAPLMLQENYLGTSPQRANQYNDNPKIRSLA
VLDLVSKAADSISDGDLVDRMIHGSQQQWALMPTHAFFSFVRPASFIYGSLAGHGQTRFT
QWLGKNSTQGKLTRMVKEIQGHMRLRVTADRHEIRQTYVPMLYERLIGRLRTEGKECVPE
VIEMMDWYYLTREDWEGVWELGVGEADWEREGNKIETQTKATFTRLYVTNTATVMLGDGC
AY
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacactaacaacgacgatgactttgtggtgccggacgaggatgagaagattgtc
aaggacaagccggccaagaagacgccctcgaaagcaagtaggaagcgaaagtctgccgta
ttggaggaggaggatgaggacgaccttgacatggaggaagccaagcctgcgaagaaacga
gcaacacccgcgaagaaggctgctaagcaagacgcaccgcaggacagtgcagaggttgcg
gccattctcaacagcatccctacaataaaggctccttcaccaccaccgaagtccggggcc
gaaggtgagaagcctaagtttcagtttggccaacatgccaactccgctgtgccagctgct
gccatcagtagtagtgagctgccacaaggcgcagacaactgtcttgcgggtctcacattc
gtcttcacaggccagcttgagcgtctaggccgtgagcagggtcaagagcttgtcaagcag
tatggtggtaaggtgactggtgctccgtcttcgaaaacgagctacgtggtgctgggcgag
gatgcaggtccgaagaagcttgagacgatcaaaaagaacaatctcaaggtcatcaacgaa
gagggactattcgagctcatcaagcgtttgccagcgaatggaggtgactccgctgcagcg
gggaagatggcggagaagcgagcgaaggaggaggagcagatgcggaaggctgtcgaagag
atggacaagcaggaggctgctgtgaagctgaagatccaggcagctgccgctgctgcttct
gccgacaaaggtggcaccccgaagggcaaaggcaagacgcccgttgacggcccagacaca
cgcctctggacggtccgatacgcaccccaacagctcagtcagatatgcggcaacaaagcg
caagtggataagctgcagcgctggctgcgcaacttcccaaagagccagcgggtcggcttc
aaaatgcccggacccgatggctcgggcacacatcgtgcagttatgatccatggcccaccc
ggtatcggcaaaacgaccgcagcacatcttgtcgcgaagctcgaaggctacgatatcgtc
gaatccaacgcctctgacacccgcagcaagaagctcgtcgacactggtctcaagggtgtc
ctctccaccacctccctcatgggctacttcgcttctggtaccgactcggtggaggccagc
aagaagaagcttgttctcatcatggacgaagtcgacggcatgtccgcgggcgaccggggc
ggtgtcggcgcccttgctgccgtctgcaagaagacccaaatccccatgatcctcatctgc
aacgaccgcaaactgcccaaaatgaaacctttcgacttcgtcacctacgacctcgccttt
cgtcggccgactacagaccaaatccggagcagaattagcacgattgctttccgcgaaggc
ctgaaaatgccggcgaacgtcatcaacgctctcatcgaaggcagtggagcagatattcgc
caagtcgtcaacatgatctccaccgccaaactcgacagccagaccctgacatacgaagaa
ggcaaagacatgtccaaagcgtgggagaaacacatcgtcctccggccctgggacatggtc
gccaaaatcctcggcggcggtctcttcaacccagcggccaaatccaccctcaacgacaag
caggaactctacttcaacgaccacgaattcgcaccactaatgctgcaagagaactacctc
ggcacctcccctcaacgtgcgaaccaatacaacgacaatccgaaaataagatccctcgcc
gtcctcgacctcgtgtcgaaagccgcagactccatctccgacggcgacctcgtggaccgc
atgatccacggctcgcagcaacaatgggccctgatgcccacccacgccttcttctccttc
gtgcgcccggcatcgttcatctacggctcgctggcgggccacggccagacgcggttcacg
cagtggttgggcaagaacagcacccaaggcaaactcacgcgcatggtgaaggagattcag
ggacatatgcgtttgcgtgtcactgcggaccggcatgagatccggcagacgtatgttccc
atgctgtatgagcggttgattgggcggttgaggacggagggaaaggagtgtgtgccggag
gtgattgagatgatggattggtactatctgacgcgggaggattgggagggggtgtgggag
ttgggggttggggaggcggattgggagagggaagggaataagattgagacgcagacgaag
gccacgtttaccagactgtacgttactaacaccgccacagttatgctcggtgatgggtgt
gcttactga
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